BLASTX nr result

ID: Cephaelis21_contig00040926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040926
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58389.1| NADH dehydrogenase subunit F [Chassalia catati]       223   1e-56
gb|AGC13017.1| NADH dehydrogenase subunit F, partial (chloroplas...   221   5e-56
gb|AGC13031.1| NADH dehydrogenase subunit F, partial (chloroplas...   213   2e-53
gb|AGC13009.1| NADH dehydrogenase subunit F, partial (chloroplas...   212   2e-53
emb|CAQ58386.1| NADH dehydrogenase subunit F [Palicourea crocea]      211   4e-53

>emb|CAQ58389.1| NADH dehydrogenase subunit F [Chassalia catati]
          Length = 683

 Score =  223 bits (568), Expect = 1e-56
 Identities = 110/127 (86%), Positives = 111/127 (87%)
 Frame = +3

Query: 3   QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVTLLTMNNKEHSSFLKKKIDPIHDSARNVT 182
           QFQNYIGKQKIPFYSLSLWGKRVYKRINKNV LLTMNNKE SSFLKKKIDPIHDSARNVT
Sbjct: 440 QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVNLLTMNNKERSSFLKKKIDPIHDSARNVT 499

Query: 183 RHFITIVHFQFENEKFYSYPYESDNTMXXXXXXXXXXXXXXGSIGIPLRKEGVNLDILSK 362
           RHFITIVHFQFENEKFYSYPYESDNTM              GSIGIPLRKEGV+LDILSK
Sbjct: 500 RHFITIVHFQFENEKFYSYPYESDNTMLFPLLVLSLFTLFVGSIGIPLRKEGVDLDILSK 559

Query: 363 WLAPSIN 383
           WLAPSIN
Sbjct: 560 WLAPSIN 566


>gb|AGC13017.1| NADH dehydrogenase subunit F, partial (chloroplast) [Chassalia sp.
           1 VIET] gi|440573055|gb|AGC13020.1| NADH dehydrogenase
           subunit F, partial (chloroplast) [Chassalia sp. 2 VIET]
          Length = 681

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/127 (85%), Positives = 111/127 (87%)
 Frame = +3

Query: 3   QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVTLLTMNNKEHSSFLKKKIDPIHDSARNVT 182
           QFQNYIGKQKIPFYSLSLWGKRVYKRINKNV LLTM+NKE SSFLKKKIDPIHDSARNVT
Sbjct: 439 QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVNLLTMHNKERSSFLKKKIDPIHDSARNVT 498

Query: 183 RHFITIVHFQFENEKFYSYPYESDNTMXXXXXXXXXXXXXXGSIGIPLRKEGVNLDILSK 362
           RHFITIVHFQFENEKFYSYPYESDNTM              GSIGIPLRKEGV+LDILSK
Sbjct: 499 RHFITIVHFQFENEKFYSYPYESDNTMLFPLLVLSLFTLFVGSIGIPLRKEGVDLDILSK 558

Query: 363 WLAPSIN 383
           WLAPSIN
Sbjct: 559 WLAPSIN 565


>gb|AGC13031.1| NADH dehydrogenase subunit F, partial (chloroplast) [Rudgea
           stipulacea]
          Length = 445

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/127 (82%), Positives = 107/127 (84%)
 Frame = +3

Query: 3   QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVTLLTMNNKEHSSFLKKKIDPIHDSARNVT 182
           QFQNYIGKQKIPFYSLSLWGK VYKRINKNV LLTMNNKE SSFLKK IDPIHDSARNVT
Sbjct: 203 QFQNYIGKQKIPFYSLSLWGKGVYKRINKNVNLLTMNNKERSSFLKKGIDPIHDSARNVT 262

Query: 183 RHFITIVHFQFENEKFYSYPYESDNTMXXXXXXXXXXXXXXGSIGIPLRKEGVNLDILSK 362
           RHFITIVHFQFENE+FYSYPYESDNTM              GSIGIPL KEGV+LDILSK
Sbjct: 263 RHFITIVHFQFENERFYSYPYESDNTMLFPLLVLSLFTLFVGSIGIPLSKEGVDLDILSK 322

Query: 363 WLAPSIN 383
           WL PSIN
Sbjct: 323 WLTPSIN 329


>gb|AGC13009.1| NADH dehydrogenase subunit F, partial (chloroplast) [Geophila
           repens]
          Length = 681

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/127 (83%), Positives = 107/127 (84%)
 Frame = +3

Query: 3   QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVTLLTMNNKEHSSFLKKKIDPIHDSARNVT 182
           QFQNYIGKQKIPFYSLSLWGK VYKRINKNV LLTMNNKE SSFLKK IDPIHDSARNVT
Sbjct: 439 QFQNYIGKQKIPFYSLSLWGKGVYKRINKNVNLLTMNNKERSSFLKKTIDPIHDSARNVT 498

Query: 183 RHFITIVHFQFENEKFYSYPYESDNTMXXXXXXXXXXXXXXGSIGIPLRKEGVNLDILSK 362
           RHFITIVHFQFENEKFYSYPYESDNTM              GSIGI L KEGV+LDILSK
Sbjct: 499 RHFITIVHFQFENEKFYSYPYESDNTMLFPLLVLSLFTLFVGSIGITLGKEGVDLDILSK 558

Query: 363 WLAPSIN 383
           WLAPSIN
Sbjct: 559 WLAPSIN 565


>emb|CAQ58386.1| NADH dehydrogenase subunit F [Palicourea crocea]
          Length = 603

 Score =  211 bits (538), Expect = 4e-53
 Identities = 105/127 (82%), Positives = 106/127 (83%)
 Frame = +3

Query: 3   QFQNYIGKQKIPFYSLSLWGKRVYKRINKNVTLLTMNNKEHSSFLKKKIDPIHDSARNVT 182
           QFQNYIGKQKIPFYSLSLWGK VYKRINKNV LLTMNNKE SSFLKKKI PIHDSARNVT
Sbjct: 453 QFQNYIGKQKIPFYSLSLWGKAVYKRINKNVNLLTMNNKECSSFLKKKIGPIHDSARNVT 512

Query: 183 RHFITIVHFQFENEKFYSYPYESDNTMXXXXXXXXXXXXXXGSIGIPLRKEGVNLDILSK 362
           RHFITI HFQFENEKFYSYPYESDNTM              GSIGIPL KEGV+LDILSK
Sbjct: 513 RHFITIAHFQFENEKFYSYPYESDNTMLLPLLVLSLFTLFVGSIGIPLSKEGVDLDILSK 572

Query: 363 WLAPSIN 383
           WL PSIN
Sbjct: 573 WLGPSIN 579


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