BLASTX nr result

ID: Cephaelis21_contig00040915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040915
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78875.1| hypothetical protein VITISV_039062 [Vitis vinifera]    72   2e-18
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    87   2e-15
gb|AAN04949.1| Putative retroelement [Oryza sativa Japonica Group]     86   2e-15
gb|ABB47144.2| retrotransposon protein, putative, Ty3-gypsy subc...    86   2e-15
gb|AAM01117.1|AC098682_21 Putative retroelement [Oryza sativa Ja...    86   2e-15

>emb|CAN78875.1| hypothetical protein VITISV_039062 [Vitis vinifera]
          Length = 1249

 Score = 72.0 bits (175), Expect(2) = 2e-18
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = +3

Query: 3    NHAALKYLLAKKESKPRLIRWILLL*EFDLEIKDRKGAENSVADHLSR 146
            +H+ LKYLL K+++K RLIRWILLL EF+L+I+D+KG EN VADHLSR
Sbjct: 909  DHSTLKYLLTKQDAKERLIRWILLLQEFNLQIRDKKGVENVVADHLSR 956



 Score = 45.1 bits (105), Expect(2) = 2e-18
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 145  GFIKANIFSRFGIPRAIISDQGSHFCN 225
            G +  NIFSRFG+P AIISD G+HFCN
Sbjct: 996  GEVPKNIFSRFGVPLAIISDGGTHFCN 1022


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +3

Query: 3    NHAALKYLLAKKESKPRLIRWILLL*EFDLEIKDRKGAENSVADHLSR 146
            +HAALKYLLAKKE+KPRLIRWILLL EFDLEI+D+KGAEN VADHLSR
Sbjct: 1260 DHAALKYLLAKKEAKPRLIRWILLLQEFDLEIRDKKGAENVVADHLSR 1307


>gb|AAN04949.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1093

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = +3

Query: 3   NHAALKYLLAKKESKPRLIRWILLL*EFDLEIKDRKGAENSVADHLSR 146
           +HAALKYLL KK++KPRL+RWILLL EFDLEIKDRKG ENSVADHLSR
Sbjct: 602 DHAALKYLLTKKDAKPRLLRWILLLQEFDLEIKDRKGVENSVADHLSR 649


>gb|ABB47144.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1120

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = +3

Query: 3   NHAALKYLLAKKESKPRLIRWILLL*EFDLEIKDRKGAENSVADHLSR 146
           +HAALKYLL KK++KPRL+RWILLL EFDLEIKDRKG ENSVADHLSR
Sbjct: 629 DHAALKYLLTKKDAKPRLLRWILLLQEFDLEIKDRKGVENSVADHLSR 676


>gb|AAM01117.1|AC098682_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1085

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = +3

Query: 3   NHAALKYLLAKKESKPRLIRWILLL*EFDLEIKDRKGAENSVADHLSR 146
           +HAALKYLL KK++KPRL+RWILLL EFDLEIKDRKG ENSVADHLSR
Sbjct: 594 DHAALKYLLTKKDAKPRLLRWILLLQEFDLEIKDRKGVENSVADHLSR 641


Top