BLASTX nr result

ID: Cephaelis21_contig00040900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040900
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...    96   2e-18
ref|XP_002337215.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004149035.1| PREDICTED: non-structural maintenance of chr...    71   1e-10
ref|XP_003592856.1| Non-structural maintenance of chromosomes el...    69   4e-10

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   LMMTCVGDGEELMPHREMVNFEINSQHESVCEEAQAALQ-TTPIRKLSRNRGLVMQEQ-T 176
           LM T VG GEELMP R  VN   NSQ +SV EE +AA   TTPIRKLSRNRGLV+QEQ  
Sbjct: 366 LMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAV 425

Query: 177 VQDSPETDDLTGRAAAVRKGK 239
           V+DSPE+DD   RAA +RKGK
Sbjct: 426 VEDSPESDDAGTRAAVIRKGK 446


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   LMMTCVGDGEELMPHREMVNFEINSQHESVCEEAQAALQ-TTPIRKLSRNRGLVMQEQ-T 176
           LM T VG GEELMP R  VN   NSQ +SV EE +AA   TTPIRKLSRNRGLV+QEQ  
Sbjct: 294 LMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAV 353

Query: 177 VQDSPETDDLTGRAAAVRKGK 239
           V+DSPE+DD   RAA +RKGK
Sbjct: 354 VEDSPESDDAGTRAAVIRKGK 374


>ref|XP_002337215.1| predicted protein [Populus trichocarpa] gi|222838488|gb|EEE76853.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LMMTCVGDGEELMPHREMVNFEINSQHESVCEEAQAALQTTPIRKLSRNRGLVMQEQTVQ 182
           LM++ V  GEELMP+R  +N   +S  + +  E QA   TTPIRK SRNRGLV+QE+TV 
Sbjct: 31  LMISAVEVGEELMPNRNQINMPSDSVADPIPVETQAGGPTTPIRKFSRNRGLVLQEKTVV 90

Query: 183 D--SPETDDLTGRAAAVRKGKRNL 248
           +  +PE D++  R  A++KGKR +
Sbjct: 91  EVSTPENDNIQVRIPAIQKGKRKM 114


>ref|XP_004149035.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Cucumis sativus] gi|449525500|ref|XP_004169755.1|
           PREDICTED: non-structural maintenance of chromosome
           element 4-like [Cucumis sativus]
          Length = 415

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   MMTCVGDGEELMPHREMVNFEINSQHESVCEEAQAA-LQTTPIRKLSRNRGLVMQEQTVQ 182
           M+  V  GEELMPHR  +N    SQ E   + +++A L TTPIRKLSRNRGLVMQ   V+
Sbjct: 330 MVDMVPVGEELMPHRTFLNSVQVSQEEVAADNSESAGLPTTPIRKLSRNRGLVMQ-SVVE 388

Query: 183 DSPETDDLTGRAAAVRKGKRNL 248
           DSP+    +G A A+ +GKR L
Sbjct: 389 DSPDNGSQSG-ATAILRGKRKL 409


>ref|XP_003592856.1| Non-structural maintenance of chromosomes element-like protein
           [Medicago truncatula] gi|355481904|gb|AES63107.1|
           Non-structural maintenance of chromosomes element-like
           protein [Medicago truncatula]
          Length = 384

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   LMMTCVGDGEELMPHREMVNFEIN-SQHESVCEEAQAALQTTPIRKLSRNRGLVMQEQT- 176
           +M   V DG+ELMPHR   +   + SQ E   + +  AL  TPIRK+SRNRG V+QE++ 
Sbjct: 299 IMKDIVPDGKELMPHRIQYSTAADPSQEEMGGDSSTQALAVTPIRKISRNRGRVLQEESV 358

Query: 177 VQDSPETDD-LTGRAAAVRKGKRNL 248
           V++SPE DD    RAAA+R+ KR L
Sbjct: 359 VEESPECDDENASRAAAIRRCKRKL 383


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