BLASTX nr result

ID: Cephaelis21_contig00040887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040887
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...   108   1e-41
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   103   6e-40
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        106   6e-39
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   113   2e-38
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   107   2e-38

>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score =  108 bits (271), Expect(2) = 1e-41
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = -2

Query: 253 PLSDDKDTIMVLVDRLTKYAHFISLAHPISAPQVAQVFLEQIFKLHGLPGSIVTDMDKLF 74
           P S+DK+ I+V+VDR TKY+HFI+L+HP +   V +VF++ +FK HGLP  I+T+ D +F
Sbjct: 385 PKSEDKEVILVVVDRFTKYSHFIALSHPFTVQHVVKVFVDNVFKHHGLPSVIITNRDMVF 444

Query: 73  TSYFWQALFKLLGVSLHYSTAYHP 2
           TS+ WQ LFK LGV L  ST+YHP
Sbjct: 445 TSHLWQDLFKTLGVKLRLSTSYHP 468



 Score = 85.9 bits (211), Expect(2) = 1e-41
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -1

Query: 437 QRIKSLFFWPGMQQDVNELVSSCDMCQRNKLEHIPYPGLLQPLAIPQHPWHYISMNFIEK 258
           QR+K +F WP M+Q+V E V   D+CQ+N  EH+PYPGLLQP+ IP+  W +ISM+FIE 
Sbjct: 324 QRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIEG 383

Query: 257 LP 252
           LP
Sbjct: 384 LP 385


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  103 bits (258), Expect(2) = 6e-40
 Identities = 48/84 (57%), Positives = 60/84 (71%)
 Frame = -2

Query: 253  PLSDDKDTIMVLVDRLTKYAHFISLAHPISAPQVAQVFLEQIFKLHGLPGSIVTDMDKLF 74
            P S  K+ I V+VDR TKYAH + L+HP S   VAQ F++ IFKLHG P +IV+D D++F
Sbjct: 1000 PSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIF 1059

Query: 73   TSYFWQALFKLLGVSLHYSTAYHP 2
            TS  WQ LFK + V L +STAYHP
Sbjct: 1060 TSKLWQELFKSMKVQLRFSTAYHP 1083



 Score = 85.5 bits (210), Expect(2) = 6e-40
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = -1

Query: 437  QRIKSLFFWPGMQQDVNELVSSCDMCQRNKLEHIPYPGLLQPLAIPQHPWHYISMNFIEK 258
            QR+K LF+WPGM+++++ +V  C +CQR+K EH  YPGLL+PL IP   W +ISM+FIE 
Sbjct: 939  QRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEG 998

Query: 257  LP 252
            LP
Sbjct: 999  LP 1000


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  106 bits (265), Expect(2) = 6e-39
 Identities = 46/84 (54%), Positives = 63/84 (75%)
 Frame = -2

Query: 253  PLSDDKDTIMVLVDRLTKYAHFISLAHPISAPQVAQVFLEQIFKLHGLPGSIVTDMDKLF 74
            P SD+KD I V+VDR TKYAHF++L+HP +A Q+   F+E  +K HGLP  IV+D D++F
Sbjct: 975  PKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIF 1034

Query: 73   TSYFWQALFKLLGVSLHYSTAYHP 2
            TS  W+ +F+  GV LH+S+AYHP
Sbjct: 1035 TSQTWKDVFEKAGVKLHFSSAYHP 1058



 Score = 79.3 bits (194), Expect(2) = 6e-39
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = -1

Query: 437  QRIKSLFFWPGMQQDVNELVSSCDMCQRNKLEHIPYPGLLQPLAIPQHPWHYISMNFIEK 258
            QR K LF+WPGM++D+   V  C +CQ+NK EH   PGLL PL IP+  W +ISM+FIE 
Sbjct: 914  QRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEG 973

Query: 257  LP 252
            LP
Sbjct: 974  LP 975


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  113 bits (283), Expect(2) = 2e-38
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = -2

Query: 253  PLSDDKDTIMVLVDRLTKYAHFISLAHPISAPQVAQVFLEQIFKLHGLPGSIVTDMDKLF 74
            P S+    IMV+VDRL+KYAHFI ++HP +A ++AQVFL  IFKLHGLP SIVTD D  F
Sbjct: 1130 PNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTF 1189

Query: 73   TSYFWQALFKLLGVSLHYSTAYHP 2
            TS FW+ LFKL G +L +S+AYHP
Sbjct: 1190 TSTFWKELFKLQGTTLKFSSAYHP 1213



 Score = 70.9 bits (172), Expect(2) = 2e-38
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = -1

Query: 434  RIKSLFFWPGMQQDVNELVSSCDMCQRNKLEHIPYPGLLQPLAIPQHPWHYISMNFIEKL 255
            R KS F+W GM+++V   +  CD+CQ+NK E+I   GLLQPL IP   W  IS++FIE L
Sbjct: 1070 RAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGL 1129

Query: 254  P 252
            P
Sbjct: 1130 P 1130


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score =  107 bits (266), Expect(2) = 2e-38
 Identities = 48/84 (57%), Positives = 62/84 (73%)
 Frame = -2

Query: 253 PLSDDKDTIMVLVDRLTKYAHFISLAHPISAPQVAQVFLEQIFKLHGLPGSIVTDMDKLF 74
           P S+ KD I V+VDR TKYAHFI L+HP +A Q+   FLE  +KLHGLP  IV+D D++F
Sbjct: 530 PKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIF 589

Query: 73  TSYFWQALFKLLGVSLHYSTAYHP 2
           TS  W+ +F+  GV LH+S+AYHP
Sbjct: 590 TSSTWKEVFEKAGVKLHFSSAYHP 613



 Score = 77.0 bits (188), Expect(2) = 2e-38
 Identities = 32/62 (51%), Positives = 45/62 (72%)
 Frame = -1

Query: 437 QRIKSLFFWPGMQQDVNELVSSCDMCQRNKLEHIPYPGLLQPLAIPQHPWHYISMNFIEK 258
           QR+K LF+WPGM+  V + V +C +CQ+NK EH    GLLQPL +P+  W +I+M+F+E 
Sbjct: 469 QRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEG 528

Query: 257 LP 252
           LP
Sbjct: 529 LP 530


Top