BLASTX nr result

ID: Cephaelis21_contig00040886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040886
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glyc...    80   2e-13
ref|XP_004155751.1| PREDICTED: potassium channel SKOR-like [Cucu...    80   2e-13
ref|XP_004140369.1| PREDICTED: potassium channel SKOR-like [Cucu...    80   2e-13
gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera ph...    77   2e-12
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12

>ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 850

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
 Frame = -3

Query: 225 VEDLRDKIQGTRGSRFALINNQLGLDKSGINRRFSRQNVRKNLSHGS----INPETNRWY 58
           V+DLRD+++ +RGSRF LI NQLGL+ +    +FSRQ +   +   S    I+P+ NRWY
Sbjct: 50  VQDLRDRLKSSRGSRFDLIENQLGLNSTW--SKFSRQALLHGIRGFSVDFVIHPD-NRWY 106

Query: 57  RAWEKFILFWALYSSIFTP 1
           RAW KFIL WA+YSS FTP
Sbjct: 107 RAWTKFILLWAVYSSFFTP 125


>ref|XP_004155751.1| PREDICTED: potassium channel SKOR-like [Cucumis sativus]
          Length = 828

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/75 (54%), Positives = 53/75 (70%)
 Frame = -3

Query: 225 VEDLRDKIQGTRGSRFALINNQLGLDKSGINRRFSRQNVRKNLSHGSINPETNRWYRAWE 46
           VE +R++I  +RGSRF LI  QL +D+S   RRFSR+N+   +    I P++ RWYRAW 
Sbjct: 29  VESVRERISSSRGSRFNLIQRQLRIDQS--RRRFSRENLINGIKCLVILPDS-RWYRAWT 85

Query: 45  KFILFWALYSSIFTP 1
           KFIL WA+YSS FTP
Sbjct: 86  KFILIWAVYSSFFTP 100


>ref|XP_004140369.1| PREDICTED: potassium channel SKOR-like [Cucumis sativus]
          Length = 828

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/75 (54%), Positives = 53/75 (70%)
 Frame = -3

Query: 225 VEDLRDKIQGTRGSRFALINNQLGLDKSGINRRFSRQNVRKNLSHGSINPETNRWYRAWE 46
           VE +R++I  +RGSRF LI  QL +D+S   RRFSR+N+   +    I P++ RWYRAW 
Sbjct: 29  VESVRERISSSRGSRFNLIQRQLRIDQS--RRRFSRENLINGIKCLVILPDS-RWYRAWT 85

Query: 45  KFILFWALYSSIFTP 1
           KFIL WA+YSS FTP
Sbjct: 86  KFILIWAVYSSFFTP 100


>gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera philoxeroides]
          Length = 849

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
 Frame = -3

Query: 225 VEDLRDKIQGTRGSRFALINNQLGLDKSGINRRFSRQNVR---KNLSHGS-INPETNRWY 58
           +E  RD+++ +RGSRF L+ N+L  + S   R+F+R+      K+L HG  I+PE NRW+
Sbjct: 46  IERPRDRMKSSRGSRFDLLVNELNHESS--QRKFTREGFFLGCKDLYHGLVIHPENNRWF 103

Query: 57  RAWEKFILFWALYSSIFTP 1
           +AW+KFIL WA+YSS FTP
Sbjct: 104 KAWDKFILLWAIYSSFFTP 122


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 10/85 (11%)
 Frame = -3

Query: 225 VEDLRDKIQGTRGSRFALINNQLGLDKS-------GINRRFSRQNVRKNLSHGSINPET- 70
           V+DLRD+I+ +RGSRF L+ N+ GL  +        + R+ SR++V   + + S  P   
Sbjct: 14  VQDLRDRIKSSRGSRFNLLENEFGLVNNTESSLITNLRRKLSRESVINGIRYVSTGPAIH 73

Query: 69  --NRWYRAWEKFILFWALYSSIFTP 1
             NRWYRAW  FIL WA+YSS FTP
Sbjct: 74  PDNRWYRAWTIFILLWAVYSSFFTP 98


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