BLASTX nr result

ID: Cephaelis21_contig00040868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040868
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
emb|CBI32045.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containi...   166   1e-39
ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   142   2e-32
ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32

>ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  177 bits (449), Expect = 8e-43
 Identities = 94/149 (63%), Positives = 108/149 (72%)
 Frame = +3

Query: 15  MKRCSIFLSSHCYQVLSYHSCLFSLESCPSFFFYRDKFLVRKSSSFGSNGPRPFPDYSPK 194
           MKR  I  S HC+QV SYHS L    +  SFF    +    K SSF S   R FPDYSPK
Sbjct: 1   MKRHVISFSRHCFQVFSYHSHLDPALNRLSFF---RRCFSEKLSSFDST-TRNFPDYSPK 56

Query: 195 KPSIKDAELVHHISMTLKQRQSENIRRTLKPFESKFRPDHLIWVMINIKNDYNLVLDFFH 374
           KP I+D+ELVH IS+ +KQR+SE +RR LKP+ESKFR DHLIWV++NIKNDY LVL FF 
Sbjct: 57  KPIIQDSELVHRISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFE 116

Query: 375 WYCLRRDPSLEARCIVIQIAVAARDSVMA 461
           W CLRRDPSLEARCIV QIA A++D  MA
Sbjct: 117 WACLRRDPSLEARCIVAQIATASKDLKMA 145


>emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  177 bits (449), Expect = 8e-43
 Identities = 94/149 (63%), Positives = 108/149 (72%)
 Frame = +3

Query: 15  MKRCSIFLSSHCYQVLSYHSCLFSLESCPSFFFYRDKFLVRKSSSFGSNGPRPFPDYSPK 194
           MKR  I  S HC+QV SYHS L    +  SFF    +    K SSF S   R FPDYSPK
Sbjct: 1   MKRHVISFSRHCFQVFSYHSHLDPALNRLSFF---RRCFSEKLSSFDST-TRNFPDYSPK 56

Query: 195 KPSIKDAELVHHISMTLKQRQSENIRRTLKPFESKFRPDHLIWVMINIKNDYNLVLDFFH 374
           KP I+D+ELVH IS+ +KQR+SE +RR LKP+ESKFR DHLIWV++NIKNDY LVL FF 
Sbjct: 57  KPIIQDSELVHRISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFE 116

Query: 375 WYCLRRDPSLEARCIVIQIAVAARDSVMA 461
           W CLRRDPSLEARCIV QIA A++D  MA
Sbjct: 117 WACLRRDPSLEARCIVAQIATASKDLKMA 145


>ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/151 (56%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  MKRCSIFLSSHCYQVLSYHSCLFSLESCPSFFFYRDKFL-VRKSSSFGSNGPRPFPDYSP 191
           MKR +I    HC+    YH   +     P   F   + L V+ S+S GS+  RPFPDYSP
Sbjct: 1   MKRVAISSYFHCFH---YH---YHCHHNPFLGFGPRRCLSVKFSTSLGSSNARPFPDYSP 54

Query: 192 KKPSIKDAELVHHISMTLKQRQSENIRRTLKPFESKFRPDHLIWVMINIKNDYNLVLDFF 371
           +KPS+ D + VHHIS T+KQR++E  RR LKPFESKFRPDHLIWV+++I++DY LVLDFF
Sbjct: 55  RKPSVTDTDFVHHISTTIKQRRAEPFRRILKPFESKFRPDHLIWVLMSIRDDYKLVLDFF 114

Query: 372 HWYCLRRDPSLEARCIVIQIAVAARDSVMAH 464
            W  LRRDPSLE+ CIV+QIAVA++D  MAH
Sbjct: 115 DWARLRRDPSLESLCIVVQIAVASKDLRMAH 145


>ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  142 bits (359), Expect = 2e-32
 Identities = 76/152 (50%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
 Frame = +3

Query: 18  KRCSIFLSSHCYQVLSYHSCLFSLESCPSFFFYRDKFLVRKSSSFGSN---GPRPFPDYS 188
           K C +F    C QV S      S   C    F+  +  + +S    S+     RPFPDYS
Sbjct: 8   KLCVVFFRFSCLQVSSN-----SASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPDYS 62

Query: 189 PKKPSIKDAELVHHISMTLKQRQSENIRRTLKPFESKFRPDHLIWVMINIKNDYNLVLDF 368
           PKKP+I+D EL+H I+  +K R+SE + R LK  ES FR DHLIWV++NIKNDYNLVL F
Sbjct: 63  PKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAF 122

Query: 369 FHWYCLRRDPSLEARCIVIQIAVAARDSVMAH 464
           F W  +RR+PSLEARCI+I IAV + D  +AH
Sbjct: 123 FDWARVRREPSLEARCIIIHIAVVSNDLRLAH 154


>ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  142 bits (359), Expect = 2e-32
 Identities = 76/152 (50%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
 Frame = +3

Query: 18  KRCSIFLSSHCYQVLSYHSCLFSLESCPSFFFYRDKFLVRKSSSFGSN---GPRPFPDYS 188
           K C +F    C QV S      S   C    F+  +  + +S    S+     RPFPDYS
Sbjct: 8   KLCVVFFRFSCLQVSSN-----SASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPDYS 62

Query: 189 PKKPSIKDAELVHHISMTLKQRQSENIRRTLKPFESKFRPDHLIWVMINIKNDYNLVLDF 368
           PKKP+I+D EL+H I+  +K R+SE + R LK  ES FR DHLIWV++NIKNDYNLVL F
Sbjct: 63  PKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAF 122

Query: 369 FHWYCLRRDPSLEARCIVIQIAVAARDSVMAH 464
           F W  +RR+PSLEARCI+I IAV + D  +AH
Sbjct: 123 FDWARVRREPSLEARCIIIHIAVVSNDLRLAH 154


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