BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040735
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CBI26127.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|NP_181235.1| pentatricopeptide repeat-containing protein [Ar...   115   5e-24
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   112   3e-23
ref|XP_002879637.1| pentatricopeptide repeat-containing protein ...   107   8e-22

>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           VAWNAML+ YSQLGL + AL LF  MR+++S+PD +TFT+ LSA AGL  +  G K+HA 
Sbjct: 37  VAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQ 96

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKNE 304
           ++V GC + LPV N+LIDMY KC S+  A RVFE++   NE
Sbjct: 97  VVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNE 137



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/100 (34%), Positives = 61/100 (61%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           V+W +M++GY++ G  + AL  F +M  +  +PD++TF + L A + L  + +G+ +H  
Sbjct: 301 VSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGS 360

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKN 301
           II  G  A++ V N L++MYAKC    G+   F+++  K+
Sbjct: 361 IIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKD 400



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           +AWN M+SGY Q G  +  L LF +MR    +PD +TF++ ++A   L    YG  +H  
Sbjct: 169 IAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGF 228

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDL 289
           II  G    + V+N+++  Y+K        +VFE +
Sbjct: 229 IIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESI 264


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           VAWNAML+ YSQLGL + AL LF  MR+++S+PD +TFT+ LSA AGL  +  G K+HA 
Sbjct: 37  VAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQ 96

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKNE 304
           ++V GC + LPV N+LIDMY KC S+  A RVFE++   NE
Sbjct: 97  VVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNE 137



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/100 (34%), Positives = 61/100 (61%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           V+W +M++GY++ G  + AL  F +M  +  +PD++TF + L A + L  + +G+ +H  
Sbjct: 281 VSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGS 340

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKN 301
           II  G  A++ V N L++MYAKC    G+   F+++  K+
Sbjct: 341 IIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKD 380



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           +AWN M+SGY Q G  +  L LF +MR    +PD +TF++ ++A   L    YG  +H  
Sbjct: 169 IAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGF 228

Query: 182 IIVLGCTAFLPVN-----------NALIDMYAKCKSSHGAYRVFEDLDSKN 301
           II  G    + V            NA+ID + K   +H A+ VF+    KN
Sbjct: 229 IIKSGWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKN 279


>ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g36980, mitochondrial; Flags: Precursor
           gi|4883614|gb|AAD31583.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254236|gb|AEC09330.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 625

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/103 (53%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           VAWN ML+ YS+LGL ++A+ LF+Q+R SD+KPD+Y+FT+ LS  A L N+ +G+K+ +L
Sbjct: 36  VAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSL 95

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDL--DSKNE 304
           +I  G  A LPVNN+LIDMY KC  +  A +VF D+  DS+NE
Sbjct: 96  VIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNE 138



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +2

Query: 5   AWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSA-SAGLPNILYGQKLHAL 181
           AWN M+SG++  G  +  L LF +M  S+ KPD YTF+S ++A SA   N++YG+ +HA+
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLD 292
           ++  G ++ +   N+++  Y K  S   A R  E ++
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE 267



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/100 (33%), Positives = 55/100 (55%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           V W  M++GY + G  + AL  F +M  S    D++ + + L A +GL  + +G+ +H  
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKN 301
           +I  G   +  V NAL+++YAKC     A R F D+ +K+
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/101 (51%), Positives = 76/101 (75%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           VAWN+M++ YSQLG  ++AL +F QMR +++KPD++TFT+ LSA AG  +  +G K+HAL
Sbjct: 37  VAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATLSACAGAGSFPFGTKIHAL 96

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKNE 304
           +I+LG  + LPVNN+LIDMY KC  +  A +VF+++   NE
Sbjct: 97  VIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINE 137



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/100 (34%), Positives = 59/100 (59%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           V+W +M++GY++ G  ++AL  F  M  +   PD++TF + L A + L  + +G+ +H  
Sbjct: 301 VSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGC 360

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKN 301
            I  G + +L V N L++MYAKC    G+   F D+ +K+
Sbjct: 361 AIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKD 400



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/94 (32%), Positives = 54/94 (57%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           +AWN M++G  + G  +  L +F +MR S  +PD +T+++ +SA       L G  LH L
Sbjct: 169 IAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGL 228

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFE 283
           +I  G ++ +   N+++ +YAK  S + A +V E
Sbjct: 229 VIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVE 262


>ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325476|gb|EFH55896.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           VAWN ML+ YS LGL ++A+ LF+Q+R SDSKPD+Y+FT+ LS    L N+  G+K+ +L
Sbjct: 36  VAWNTMLTSYSHLGLHQEAIALFTQLRFSDSKPDDYSFTAILSTCGSLGNVRLGRKIQSL 95

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDL--DSKNE 304
           +I  G  A  PVNN+LIDMY KC  +  A +VF D+   S+NE
Sbjct: 96  VIRSGFCASSPVNNSLIDMYGKCSDTLSANKVFRDMCCHSRNE 138



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/96 (33%), Positives = 56/96 (58%)
 Frame = +2

Query: 5   AWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHALI 184
           AWN M+SG++Q G  +  L LF +M  S+ +PD +TF+S ++A A   N++YG  +HA++
Sbjct: 171 AWNIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVM 230

Query: 185 IVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLD 292
           +  G  + +   N+++  YAK        R  E ++
Sbjct: 231 VRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIE 266



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/100 (32%), Positives = 55/100 (55%)
 Frame = +2

Query: 2   VAWNAMLSGYSQLGLQKDALLLFSQMRVSDSKPDNYTFTSALSASAGLPNILYGQKLHAL 181
           V W  M++GY + G  + AL  F +M  S    D++ + + L A +GL  + +G+ +H  
Sbjct: 302 VTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 361

Query: 182 IIVLGCTAFLPVNNALIDMYAKCKSSHGAYRVFEDLDSKN 301
           +I  G   +  V NAL+++YAKC     + R F D+ +K+
Sbjct: 362 LIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKD 401