BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040673
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    96   1e-17
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   1e-16
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ...    88   1e-15
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    83   5e-14
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    80   3e-13

>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +3

Query: 168 LVWHYSKLGEYSVKSGQALAMQLAQERLHVSGPSSDSRETRRKWSI*WKQEVKKKVQMFV 347
           + W Y+  G YSVKSG  L  +L+Q++ H S PS +    +  ++  WKQ    K++ F 
Sbjct: 456 ITWIYTHDGNYSVKSGYHLLRKLSQQQ-HASLPSPNEVSAQTVFTNIWKQNAPPKIKHFW 514

Query: 348 WKCIHRAIPVKAELIKRKMQIDPICKQCGETAETIEHLFFHCETTQKIWHIAPVK-WEGR 524
           W+  H A+P    L +R++  D  C++CGE +E + HL F C  +++IW  A +K   G 
Sbjct: 515 WRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGD 574

Query: 525 NIHTDCFSDEWEEICRVNSQHR 590
           ++ ++ F+   E I ++N   R
Sbjct: 575 SLMSNSFNQNLESIQKLNQSAR 596


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 89.7 bits (221), Expect(2) = 1e-16
 Identities = 44/125 (35%), Positives = 70/125 (56%)
 Frame = +3

Query: 171  VWHYSKLGEYSVKSGQALAMQLAQERLHVSGPSSDSRETRRKWSI*WKQEVKKKVQMFVW 350
            +W  SK G+++V+S  A   +L ++R   +GPS+      + W   WK ++  KV++F W
Sbjct: 1013 MWMMSKNGQFTVRS--AYYHELLEDRK--TGPSTSRGPNLKLWQKIWKAKIPPKVKLFSW 1068

Query: 351  KCIHRAIPVKAELIKRKMQIDPICKQCGETAETIEHLFFHCETTQKIWHIAPVKWEGRNI 530
            K IH  + V   + KR M ID  C +CGE  ET EHL + C+ + + W+I+P++    NI
Sbjct: 1069 KAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNI 1128

Query: 531  HTDCF 545
                F
Sbjct: 1129 EAGSF 1133



 Score = 22.7 bits (47), Expect(2) = 1e-16
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 620  LLWHI*KARCEFEYNNTNITAQEVVLRANRG 712
            + W+I   R ++ +    +  QEVV RA RG
Sbjct: 1156 ICWNIWLGRNKWVFEKKKLAFQEVVERAVRG 1186


>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score = 88.2 bits (217), Expect(2) = 1e-15
 Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = +3

Query: 183  SKLGEYSVKSGQALAMQLAQERLHVSGPSSDSRETRRKWSI*-WKQEVKKKVQMFVWKCI 359
            +K G+YSVKSG  +A+    +     GP +   E   KW+   WK +   KV++FVWK +
Sbjct: 1217 TKTGDYSVKSGYYVAIGAEGD-----GPEA---EGDFKWTNHVWKLDCAPKVKLFVWKVL 1268

Query: 360  HRAIPVKAELIKRKMQIDPICKQCGETAETIEHLFFHCETTQKIWHIAPV 509
              A+PV   L++R + IDP CK+CG   E+I HL FHC+  Q++WH+AP+
Sbjct: 1269 KGAVPVGERLLERHIDIDPRCKRCGSN-ESITHLLFHCQFAQRVWHLAPL 1317



 Score = 20.8 bits (42), Expect(2) = 1e-15
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 617  YLLWHI*KARCEFEYNNTNITAQEVVLRANR 709
            ++ W+I KAR  F +   + + ++ +  A R
Sbjct: 1355 WIFWNIWKARNRFVFEGVSASPEDTLSSAIR 1385


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
 Frame = +3

Query: 171  VWHYSKLGEYSVKSGQALAMQLAQERLHVSG---PSSDSRETRRKWSI*WKQEVKKKVQM 341
            VW +SK GEYSVKSG  LA Q  +  L       PS++  + +      W      K+++
Sbjct: 1005 VWLHSKSGEYSVKSGYWLAFQTNKPELIREARVQPSTNGLKEKI-----WSTLTSPKIKL 1059

Query: 342  FVWKCIHRAIPVKAELIKRKMQIDPICKQCGETAETIEHLFFHCETTQKIWHIAPV 509
            F+W+ +  A+PV  ++I+R M IDP C+ CGE  E+I H+ F C   +++W ++ V
Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGV 1115


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 39/113 (34%), Positives = 64/113 (56%)
 Frame = +3

Query: 171  VWHYSKLGEYSVKSGQALAMQLAQERLHVSGPSSDSRETRRKWSI*WKQEVKKKVQMFVW 350
            VW ++K GEYSVKSG  LA Q    +L +   ++    T       W  +   K++MF+W
Sbjct: 779  VWLHAKTGEYSVKSGYWLAFQ--SNKLDLIQQANLLPSTNGLKEQVWSTKSSPKIKMFLW 836

Query: 351  KCIHRAIPVKAELIKRKMQIDPICKQCGETAETIEHLFFHCETTQKIWHIAPV 509
            + +  A+PV  ++I+R M IDP C+ CG+  E+  H+ F C   +++W ++ V
Sbjct: 837  RILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889