BLASTX nr result

ID: Cephaelis21_contig00040672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040672
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              68   7e-10
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    68   9e-10
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    65   4e-09
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    65   4e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    65   4e-09

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   QKSNIKWHAQGDRNTQFYHASVASKRAHLAITKLKDENGTWI-QGRDVLSSHVA-SYFQS 174
           QKS   W   GD N++++HA    +RA   I  L DENG W  + +DV   H+A SYF++
Sbjct: 188 QKSRSLWMKVGDNNSKYFHALTKQRRARNRIIGLHDENGKWFAEDKDV--QHIAVSYFET 245

Query: 175 LFCENNQWNTAAASEFLSYIPSMVTDEENISLLRPVLLKEVHDAVFXXXXXXXXXXDG 348
           LF ++N  N A   E LS + +++TD+ N  L  P    EV  A+F          DG
Sbjct: 246 LFNKSNPQNIA---ESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPEKAPGPDG 300


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1    QKSNIKWHAQGDRNTQFYHASVASKRAHLAITKLKDENGTWIQGRDVLSSHVASYFQSLF 180
            Q+S + W   GD+N+ F+H +   +R +  I +LKD++G W+     ++     YF +L+
Sbjct: 947  QRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALY 1006

Query: 181  CEN--NQWNTAAASEFLSYIPSMVTDEENISLLRPVLLKEVHDAVFXXXXXXXXXXDG 348
              N   QW      E L ++ + VT E N  L  PV L EV  AVF          DG
Sbjct: 1007 QSNGPQQW-----EEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPDG 1059


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/103 (28%), Positives = 58/103 (56%)
 Frame = +1

Query: 1   QKSNIKWHAQGDRNTQFYHASVASKRAHLAITKLKDENGTWIQGRDVLSSHVASYFQSLF 180
           Q++++ W  +GDRNT F+HA+ + ++    I +LK E+G+W++  +   S +  YF+++F
Sbjct: 550 QRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNMF 609

Query: 181 CENNQWNTAAASEFLSYIPSMVTDEENISLLRPVLLKEVHDAV 309
             N           LS +   VT+E N  L+   +++E+  ++
Sbjct: 610 QSN---GCQHPERLLSKVKKKVTEEMNECLMAEFIVEEIKTSI 649


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
           gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/103 (28%), Positives = 58/103 (56%)
 Frame = +1

Query: 1   QKSNIKWHAQGDRNTQFYHASVASKRAHLAITKLKDENGTWIQGRDVLSSHVASYFQSLF 180
           Q++++ W  +GDRNT F+HA+ + ++    I +LK E+G+W++  +   S +  YF+++F
Sbjct: 587 QRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNMF 646

Query: 181 CENNQWNTAAASEFLSYIPSMVTDEENISLLRPVLLKEVHDAV 309
             N           LS +   VT+E N  L+   +++E+  ++
Sbjct: 647 QSN---GCQHPERLLSKVKKKVTEEMNECLMAEFIVEEIKTSI 686


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   QKSNIKWHAQGDRNTQFYHASVASKRAHLAITKLKDENG-TWIQGRDVLSSHVASYFQSL 177
           +KS I W   GDRNT+++HA+  ++RA   I KL DE G  W    D L     +YF+ L
Sbjct: 338 EKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDED-LGRVAEAYFKKL 396

Query: 178 FCENNQWNTAAASEFLSYIPSMVTDEENISLLRPVLLKEVHDAVFXXXXXXXXXXDG 348
           F   +   T    E L  +  +V+D+ N +LL P+  +EV  A F          DG
Sbjct: 397 FASEDVGYTV---EELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDG 450


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