BLASTX nr result
ID: Cephaelis21_contig00040529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00040529
(926 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 129 7e-60
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 129 7e-60
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 132 2e-59
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 130 2e-57
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 136 6e-57
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 129 bits (325), Expect(3) = 7e-60
Identities = 64/169 (37%), Positives = 94/169 (55%)
Frame = -2
Query: 916 IYVEKSGLAQQNILSTLHSAPLGGHPGQTVSIQQAKTLFFWPNLKQNMIQ*VRNSDICQR 737
I V ++ +L + H + LGGH G+ + Q+ K LF+WP +K + Q V+ +CQ+
Sbjct: 437 IVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQK 496
Query: 736 NKD*HTXXXXXXXXXXXXXQV*KHISMDFIEKFPVSEGCDTILGVIDRLTK*GHFLSLAH 557
NK H HI+MDF+E P SEG D I ++DR TK HF+ L+H
Sbjct: 497 NKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSH 556
Query: 556 PFTASMVAQLFLDNVFRLHGLLETIVFD*DNIFLNNFWQPLFKTMGVFL 410
PFTA + FL++ ++LHGL IV D D IF ++ W+ +F+ GV L
Sbjct: 557 PFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKL 605
Score = 97.8 bits (242), Expect(3) = 7e-60
Identities = 45/75 (60%), Positives = 57/75 (76%)
Frame = -1
Query: 419 GVSLYMSTAYHPQSDGQSERLNQCLESYLRCFSSEKPSS*KHCLLTVE*WYNTSFHSSIF 240
GV L+ S+AYHPQ+DGQSER+NQCLE+YLRC +S KP K L E WYNT+FH+S+
Sbjct: 602 GVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLG 661
Query: 239 MIPHEALYGRKPVTL 195
M P++AL+G KP L
Sbjct: 662 MSPYQALHGIKPPLL 676
Score = 51.6 bits (122), Expect(3) = 7e-60
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -3
Query: 108 HLTKAQARIKFFADHKHSKRAFAVGDWVYLKLQPYK 1
HL KAQAR+K+FAD +R VGD VYLK+QPY+
Sbjct: 706 HLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYR 741
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 129 bits (325), Expect(3) = 7e-60
Identities = 64/169 (37%), Positives = 94/169 (55%)
Frame = -2
Query: 916 IYVEKSGLAQQNILSTLHSAPLGGHPGQTVSIQQAKTLFFWPNLKQNMIQ*VRNSDICQR 737
I V ++ +L + H + LGGH G+ + Q+ K LF+WP +K + Q V+ +CQ+
Sbjct: 216 IVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQK 275
Query: 736 NKD*HTXXXXXXXXXXXXXQV*KHISMDFIEKFPVSEGCDTILGVIDRLTK*GHFLSLAH 557
NK H HI+MDF+E P SEG D I ++DR TK HF+ L+H
Sbjct: 276 NKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSH 335
Query: 556 PFTASMVAQLFLDNVFRLHGLLETIVFD*DNIFLNNFWQPLFKTMGVFL 410
PFTA + FL++ ++LHGL IV D D IF ++ W+ +F+ GV L
Sbjct: 336 PFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKL 384
Score = 97.8 bits (242), Expect(3) = 7e-60
Identities = 45/75 (60%), Positives = 57/75 (76%)
Frame = -1
Query: 419 GVSLYMSTAYHPQSDGQSERLNQCLESYLRCFSSEKPSS*KHCLLTVE*WYNTSFHSSIF 240
GV L+ S+AYHPQ+DGQSER+NQCLE+YLRC +S KP K L E WYNT+FH+S+
Sbjct: 381 GVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLG 440
Query: 239 MIPHEALYGRKPVTL 195
M P++AL+G KP L
Sbjct: 441 MSPYQALHGIKPPLL 455
Score = 51.6 bits (122), Expect(3) = 7e-60
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -3
Query: 108 HLTKAQARIKFFADHKHSKRAFAVGDWVYLKLQPYK 1
HL KAQAR+K+FAD +R VGD VYLK+QPY+
Sbjct: 485 HLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYR 520
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 132 bits (332), Expect(3) = 2e-59
Identities = 69/169 (40%), Positives = 102/169 (60%)
Frame = -2
Query: 916 IYVEKSGLAQQNILSTLHSAPLGGHPGQTVSIQQAKTLFFWPNLKQNMIQ*VRNSDICQR 737
I++ + L QQ IL+ LH+A +GGH G V+ Q+ K LF WP +++++ + V++ DICQR
Sbjct: 2333 IWIGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQR 2392
Query: 736 NKD*HTXXXXXXXXXXXXXQV*KHISMDFIEKFPVSEGCDTILGVIDRLTK*GHFLSLAH 557
K H Q + I+MDFIE P S D IL ++D+ +K HFL L H
Sbjct: 2393 AKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPLKH 2452
Query: 556 PFTASMVAQLFLDNVFRLHGLLETIVFD*DNIFLNNFWQPLFKTMGVFL 410
PFTA VAQLF++++ +HGL + IV D D +F ++ W+ LF+ G L
Sbjct: 2453 PFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKELFRRAGTQL 2501
Score = 94.4 bits (233), Expect(3) = 2e-59
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = -1
Query: 419 GVSLYMSTAYHPQSDGQSERLNQCLESYLRCFSSEKPSS*KHCLLTVE*WYNTSFHSSIF 240
G L MS++YHPQSDGQ+ER+NQC+E +LRCF PS KH L + WYNTSFHS++
Sbjct: 2498 GTQLRMSSSYHPQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFHSALG 2557
Query: 239 MIPHEALYGRKP 204
M P E L+G KP
Sbjct: 2558 MTPFEVLFGHKP 2569
Score = 50.4 bits (119), Expect(3) = 2e-59
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -3
Query: 108 HLTKAQARIKFFADHKHSKRAFAVGDWVYLKLQPY 4
HL +AQ R+K AD K S+R F VGDWV++KLQPY
Sbjct: 2602 HLLRAQQRMKSQADLKRSERCFVVGDWVFMKLQPY 2636
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 130 bits (327), Expect(3) = 2e-57
Identities = 65/161 (40%), Positives = 96/161 (59%)
Frame = -2
Query: 889 QQNILSTLHSAPLGGHPGQTVSIQQAKTLFFWPNLKQNMIQ*VRNSDICQRNKD*HTXXX 710
QQ +L +H +GGH G + + K +F+WP ++ +++Q V++ +CQ++K
Sbjct: 1122 QQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYP 1181
Query: 709 XXXXXXXXXXQV*KHISMDFIEKFPVSEGCDTILGVIDRLTK*GHFLSLAHPFTASMVAQ 530
Q IS+DFIE P S + IL V+D+ +K GHFL L HPFTA+ VA+
Sbjct: 1182 GLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVAR 1241
Query: 529 LFLDNVFRLHGLLETIVFD*DNIFLNNFWQPLFKTMGVFLS 407
+FLDNV++LHGL I+ D D IF ++FWQ LF+ G LS
Sbjct: 1242 VFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLS 1282
Score = 89.0 bits (219), Expect(3) = 2e-57
Identities = 44/86 (51%), Positives = 56/86 (65%)
Frame = -1
Query: 419 GVSLYMSTAYHPQSDGQSERLNQCLESYLRCFSSEKPSS*KHCLLTVE*WYNTSFHSSIF 240
G +L MS++YHPQSDGQ+ERLNQCLE++LRC+ PS L E WYNT+ HS++
Sbjct: 1278 GTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLG 1337
Query: 239 MIPHEALYGRKPVTLPLGPYLDTVIP 162
P E LYG P G +DTV+P
Sbjct: 1338 RTPFEVLYGHTP--RHFGILVDTVVP 1361
Score = 51.2 bits (121), Expect(3) = 2e-57
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -3
Query: 108 HLTKAQARIKFFADHKHSKRAFAVGDWVYLKLQPY 4
HL +AQ R+K AD + S+R F+VGDWVYLKLQPY
Sbjct: 1382 HLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPY 1416
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 136 bits (342), Expect(3) = 6e-57
Identities = 68/169 (40%), Positives = 98/169 (57%)
Frame = -2
Query: 916 IYVEKSGLAQQNILSTLHSAPLGGHPGQTVSIQQAKTLFFWPNLKQNMIQ*VRNSDICQR 737
IYV ++G + ++ HS+ GGH G + Q+ K LF+WP LK+ + +RN +CQ
Sbjct: 526 IYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQV 585
Query: 736 NKD*HTXXXXXXXXXXXXXQV*KHISMDFIEKFPVSEGCDTILGVIDRLTK*GHFLSLAH 557
K H HISMDF+E P S+G D IL V+DRLTK HF++L+H
Sbjct: 586 TKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSH 645
Query: 556 PFTASMVAQLFLDNVFRLHGLLETIVFD*DNIFLNNFWQPLFKTMGVFL 410
P+T V Q+F+DN+ +LHG+ IV D D +F + F+Q +FK+ V L
Sbjct: 646 PYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQL 694
Score = 87.8 bits (216), Expect(3) = 6e-57
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = -1
Query: 416 VSLYMSTAYHPQSDGQSERLNQCLESYLRCFSSEKPSS*KHCLLTVE*WYNTSFHSSIFM 237
V L STAYHPQ+DGQ+ER+NQCLESYLRC + ++P + + E WYNT++H++I M
Sbjct: 692 VQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQM 751
Query: 236 IPHEALYGRKP 204
P +ALYG P
Sbjct: 752 TPFKALYGYSP 762
Score = 45.1 bits (105), Expect(3) = 6e-57
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = -3
Query: 195 SPRAIP*YSHPCFHEYDSK-----RVEVM*SL*DHLTKAQARIKFFADHKHSKRAFAVGD 31
SP I +S PC +++ + ++ L + AQ R+K++AD ++R VGD
Sbjct: 761 SPPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGD 820
Query: 30 WVYLKLQPYK 1
VYLKLQPY+
Sbjct: 821 MVYLKLQPYR 830