BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040474
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    75   7e-12
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    75   7e-12
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    74   1e-11
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    74   1e-11
emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]              72   6e-11

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -1

Query: 258  LNRLLPNLVSVEQAAFVQGRDISDNVLLVQEMVKHI--DRPTR*SNIIFKFDMFKAFDMV 85
            L ++LP+++S  Q+AFV GR ISDN+L+  EM  ++   R  +     FK DM KA+D V
Sbjct: 781  LKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRV 840

Query: 84   SWDFLGSLLLKLGFNTEFVKMIKNICS 4
             W FL  ++LKLGF+T++V +I    S
Sbjct: 841  EWSFLHDMILKLGFHTDWVNLIMKCVS 867


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -1

Query: 258  LNRLLPNLVSVEQAAFVQGRDISDNVLLVQEMVKHI--DRPTR*SNIIFKFDMFKAFDMV 85
            L ++LP+++S  Q+AFV GR ISDN+L+  EM  ++   R  +     FK DM KA+D V
Sbjct: 754  LKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRV 813

Query: 84   SWDFLGSLLLKLGFNTEFVKMIKNICS 4
             W FL  ++LKLGF+T++V +I    S
Sbjct: 814  EWSFLHDMMLKLGFHTDWVNLIMKCVS 840


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -1

Query: 258 LNRLLPNLVSVEQAAFVQGRDISDNVLLVQEMVKHI--DRPTR*SNIIFKFDMFKAFDMV 85
           L ++LP+++S  Q+AFV GR ISDN+L+  EM  ++   R  +     FK DM KA+D V
Sbjct: 726 LKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRV 785

Query: 84  SWDFLGSLLLKLGFNTEFVKMIKNICS 4
            W FL  ++LKLGF+T++V +I    S
Sbjct: 786 EWSFLHDMMLKLGFHTDWVNLIMKCVS 812


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -1

Query: 258 LNRLLPNLVSVEQAAFVQGRDISDNVLLVQEMVKHI--DRPTR*SNIIFKFDMFKAFDMV 85
           L ++LP+++S  Q+AFV GR ISDN+L+  EM  ++   R  +     FK DM KA+D V
Sbjct: 722 LKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRV 781

Query: 84  SWDFLGSLLLKLGFNTEFVKMIKNICS 4
            W FL  ++LKLGF+T++V +I    S
Sbjct: 782 EWSFLHDMMLKLGFHTDWVNLIMKCVS 808


>emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/81 (41%), Positives = 52/81 (64%)
 Frame = -1

Query: 258 LNRLLPNLVSVEQAAFVQGRDISDNVLLVQEMVKHIDRPTR*SNIIFKFDMFKAFDMVSW 79
           L  +LP ++S  Q AFV+GR+I +N+ L QE+ +  +R     N+I K DM KA+D + W
Sbjct: 24  LASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHNVIIKLDMGKAYDRLEW 83

Query: 78  DFLGSLLLKLGFNTEFVKMIK 16
           DFL  +LL+ GF+  +V  I+
Sbjct: 84  DFLFQVLLRFGFHPGWVNYIR 104