BLASTX nr result

ID: Cephaelis21_contig00040425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040425
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]   109   3e-22
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...   104   8e-21
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/90 (55%), Positives = 65/90 (72%)
 Frame = -3

Query: 272 PSLPLSSKTSAFHIHPASNPPFELLQTHPSFSLLTKCRKMDCFKQIHANFIKFGLHNTHF 93
           PSL +   T   H  P S+PP++LLQ HPS +LL+ C+     KQIH+  IK GLHNT F
Sbjct: 8   PSLVMPPPT--LHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQF 65

Query: 92  GLSKLVEFCAVNPLGDLTYALLIFEAIENP 3
            LSKL+EFCA++P G+L+YALL+FE+IE P
Sbjct: 66  ALSKLIEFCAISPFGNLSYALLLFESIEQP 95


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/90 (55%), Positives = 65/90 (72%)
 Frame = -3

Query: 272 PSLPLSSKTSAFHIHPASNPPFELLQTHPSFSLLTKCRKMDCFKQIHANFIKFGLHNTHF 93
           PSL +   T   H  P S+PP++LLQ HPS +LL+ C+     KQIH+  IK GLHNT F
Sbjct: 8   PSLVMPPPT--LHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQF 65

Query: 92  GLSKLVEFCAVNPLGDLTYALLIFEAIENP 3
            LSKL+EFCA++P G+L+YALL+FE+IE P
Sbjct: 66  ALSKLIEFCAISPFGNLSYALLLFESIEQP 95


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/93 (53%), Positives = 69/93 (74%)
 Frame = -3

Query: 281 MALPSLPLSSKTSAFHIHPASNPPFELLQTHPSFSLLTKCRKMDCFKQIHANFIKFGLHN 102
           ++ PSL LS    +FH+ P+S+PP+ +LQ HPS  LL+KC+ +  FKQIHA+ IK GLHN
Sbjct: 3   LSSPSLLLSP---SFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHN 59

Query: 101 THFGLSKLVEFCAVNPLGDLTYALLIFEAIENP 3
           T F LSKL+EF AV+  GD++YA+ +F +IE P
Sbjct: 60  TLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  104 bits (259), Expect = 8e-21
 Identities = 45/77 (58%), Positives = 60/77 (77%)
 Frame = -3

Query: 233 IHPASNPPFELLQTHPSFSLLTKCRKMDCFKQIHANFIKFGLHNTHFGLSKLVEFCAVNP 54
           I P S+PP++ LQTHPS +LL+ C+ +   KQIH+  IK GLHNTHF LSKL+EFC ++P
Sbjct: 11  ILPFSDPPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISP 70

Query: 53  LGDLTYALLIFEAIENP 3
            GDL+YALL+F++I  P
Sbjct: 71  YGDLSYALLLFKSIGKP 87


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/72 (58%), Positives = 56/72 (77%)
 Frame = -3

Query: 218 NPPFELLQTHPSFSLLTKCRKMDCFKQIHANFIKFGLHNTHFGLSKLVEFCAVNPLGDLT 39
           +PP++L+  HPS +LL+ C+ +   KQIH+  IK GLHNTHF LSKL+EFCAV+P GDL+
Sbjct: 20  SPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLS 79

Query: 38  YALLIFEAIENP 3
           YAL +F+ I NP
Sbjct: 80  YALSLFKTIRNP 91


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