BLASTX nr result

ID: Cephaelis21_contig00040391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040391
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...    74   2e-11
dbj|BAF00637.1| hypothetical protein [Arabidopsis thaliana]            55   5e-06
ref|NP_180130.1| tudor-like protein [Arabidopsis thaliana] gi|48...    55   5e-06

>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 28/108 (25%)
 Frame = +2

Query: 14  MRFEKGSKVEVFNKKEV-SMSWRSGQILSGDDHTYNVQYYYY-----PGD---------- 145
           MRF+KGSKVEVF+K +V S SWR  +I+ G+ HTY V+Y  +     PGD          
Sbjct: 1   MRFKKGSKVEVFSKIDVPSGSWRCAEIICGNGHTYTVRYEAHAENWAPGDVVEVFDDFSW 60

Query: 146 ------------YYMVRLLGSSMESIVYKLNIRDRLLWLDDEWILMGK 253
                       Y++ R++GSS+E  V K  IR R  W D +WI++GK
Sbjct: 61  KMATISKVLGKKYFLARIVGSSLEFKVSKSGIRTRQSWQDGKWIVIGK 108


>dbj|BAF00637.1| hypothetical protein [Arabidopsis thaliana]
          Length = 164

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +2

Query: 14  MRFEKGSKVEVFNKKEVSMS-WRSGQILSGDDHTYNVQYYYY 136
           MRF +GS+VEVF+ KE S   WRS +I+SG+ HTYNV+YY +
Sbjct: 1   MRFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSF 42


>ref|NP_180130.1| tudor-like protein [Arabidopsis thaliana] gi|4874300|gb|AAD31362.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330252627|gb|AEC07721.1| tudor-like protein
           [Arabidopsis thaliana]
          Length = 381

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +2

Query: 14  MRFEKGSKVEVFNKKEVSMS-WRSGQILSGDDHTYNVQYYYY 136
           MRF +GS+VEVF+ KE S   WRS +I+SG+ HTYNV+YY +
Sbjct: 1   MRFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSF 42


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