BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040208
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   154   9e-36
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   150   8e-35
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   146   2e-33
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   146   2e-33
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   145   4e-33

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  154 bits (388), Expect = 9e-36
 Identities = 63/128 (49%), Positives = 98/128 (76%)
 Frame = -2

Query: 385 LCSVPYKLVTKIIVNRLRRVITRLVAPNQVSFIPGRNITDNIIISQEIIHSMRCSRSKEK 206
           LC++ YK+VTK+I+NRL+ ++  L++P Q SF+P R ITDN+II QE+ HSMR  + K+ 
Sbjct: 516 LCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKG 575

Query: 205 WMVIKVDLEKAYDHLKWSFIHETLKDAGIPENIIRVIMECITSSTMQVLWNGALTETFKP 26
           +M +K+D EKAYD L+W+FI E+L +  IP++++ ++M C++S+ +Q+LWNG   E   P
Sbjct: 576 FMAVKIDFEKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQILWNGEPMEKICP 635

Query: 25  SRGIRQGD 2
           +RG+RQGD
Sbjct: 636 TRGLRQGD 643


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  150 bits (380), Expect = 8e-35
 Identities = 66/128 (51%), Positives = 96/128 (75%)
 Frame = -2

Query: 385 LCSVPYKLVTKIIVNRLRRVITRLVAPNQVSFIPGRNITDNIIISQEIIHSMRCSRSKEK 206
           LC+V +K++TK++V RL+ VI++L+ P Q SFIPGR   DNI++ QE +HSMR  + ++ 
Sbjct: 325 LCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRKG 384

Query: 205 WMVIKVDLEKAYDHLKWSFIHETLKDAGIPENIIRVIMECITSSTMQVLWNGALTETFKP 26
           WM++K+DLEKAYD ++W F+ ETL+ AG+ E  I+ IMEC+    M +LWNG  T++F P
Sbjct: 385 WMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTP 444

Query: 25  SRGIRQGD 2
            RG+RQGD
Sbjct: 445 ERGLRQGD 452


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/128 (50%), Positives = 95/128 (74%)
 Frame = -2

Query: 385 LCSVPYKLVTKIIVNRLRRVITRLVAPNQVSFIPGRNITDNIIISQEIIHSMRCSRSKEK 206
           LC+V +K++TK+IVNRL++VI +L+ P Q +FIPGR   DNI++ QE +HSMR  + ++ 
Sbjct: 223 LCNVLFKIITKMIVNRLKKVILKLIGPAQANFIPGRLSIDNIVLVQEAVHSMRRKKGRKG 282

Query: 205 WMVIKVDLEKAYDHLKWSFIHETLKDAGIPENIIRVIMECITSSTMQVLWNGALTETFKP 26
           WM++K+DLEKAYD ++W+F+ ETL   G+ E     IM  +T  +M VLWNG  T++F P
Sbjct: 283 WMLLKLDLEKAYDRIRWNFLQETLVATGLSEVWTHRIMAGVTDPSMSVLWNGGKTDSFVP 342

Query: 25  SRGIRQGD 2
           +RG+RQGD
Sbjct: 343 ARGLRQGD 350


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/128 (50%), Positives = 95/128 (74%)
 Frame = -2

Query: 385 LCSVPYKLVTKIIVNRLRRVITRLVAPNQVSFIPGRNITDNIIISQEIIHSMRCSRSKEK 206
           LC+V +K++TK++V RL+ VI++L+ P Q SFIPGR   DNI++ QE +HSMR  + ++ 
Sbjct: 373 LCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKG 432

Query: 205 WMVIKVDLEKAYDHLKWSFIHETLKDAGIPENIIRVIMECITSSTMQVLWNGALTETFKP 26
           WM++K+DLEKAYD ++W F+ ETL+ AG+ E     IM  +T  +M VLWNG  T++F P
Sbjct: 433 WMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVP 492

Query: 25  SRGIRQGD 2
           +RG+RQGD
Sbjct: 493 ARGLRQGD 500


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  145 bits (365), Expect = 4e-33
 Identities = 62/128 (48%), Positives = 94/128 (73%)
 Frame = -2

Query: 385 LCSVPYKLVTKIIVNRLRRVITRLVAPNQVSFIPGRNITDNIIISQEIIHSMRCSRSKEK 206
           LC+  YK++TK+I NR++ ++  L+ P+Q SF+PGRNI +NIII++E+    + S  K  
Sbjct: 514 LCNTVYKMITKVIANRIKPILGELIHPSQTSFVPGRNIQENIIIAKEMAFLFKKSNPKRN 573

Query: 205 WMVIKVDLEKAYDHLKWSFIHETLKDAGIPENIIRVIMECITSSTMQVLWNGALTETFKP 26
            M +K+DL KAYD L+W FI ETL+    P+++I +IM+CI+S  + ++WNG +T++F P
Sbjct: 574 IMALKIDLSKAYDSLEWGFIRETLQGFNFPQSLIALIMDCISSPAISLIWNGEVTQSFSP 633

Query: 25  SRGIRQGD 2
           SRGIRQGD
Sbjct: 634 SRGIRQGD 641