BLASTX nr result

ID: Cephaelis21_contig00040196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040196
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarp...    73   3e-11
ref|XP_004146878.1| PREDICTED: tubulin-folding cofactor C-like [...    66   3e-09
ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinu...    65   6e-09
ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like...    64   1e-08
ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like...    64   1e-08

>ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarpa]
           gi|222856531|gb|EEE94078.1| tubulin folding cofactor
           [Populus trichocarpa]
          Length = 324

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/86 (44%), Positives = 52/86 (60%)
 Frame = +3

Query: 66  PNPARNDGMSPFEEKPKIGIGNVGFGASLESSNGFREKESEVLLREFQKDCEIGEFTLSK 245
           PNP  N   +P    P           S+  S G R KE+++L ++F+   EIGEFTLS 
Sbjct: 136 PNPG-NSNTNPIPPNPS------HIPQSIRDSPGIRNKENQILSKKFKNFKEIGEFTLSD 188

Query: 246 LNGCVVKLKGCLRALFVNKLRDCKVY 323
           L+ C V+L GC+ ALFVN+LR+C+VY
Sbjct: 189 LDSCEVRLIGCINALFVNRLRNCRVY 214


>ref|XP_004146878.1| PREDICTED: tubulin-folding cofactor C-like [Cucumis sativus]
           gi|449513139|ref|XP_004164243.1| PREDICTED:
           tubulin-folding cofactor C-like [Cucumis sativus]
          Length = 356

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +3

Query: 147 SLESSNGFREKESEVLLREFQKDCEIGEFTLSKLNGCVVKLKGCLRALFVNKLRDCKVY 323
           S   S G R+K+ E+L++ F K  ++GEFT+S L+ C VKL G +RALF++KLR+CKVY
Sbjct: 184 SARDSPGIRDKDGEILVKNF-KGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVY 241


>ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinus communis]
           gi|223527402|gb|EEF29542.1| tubulin folding cofactor C,
           putative [Ricinus communis]
          Length = 351

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = +3

Query: 150 LESSNGFREKESEVLLREFQKDCEIGEFTLSKLNGCVVKLKGCLRALFVNKLRDCKVY 323
           +  S G R KE+++L + F K  +IGEFTL  L+ C V+L GC+ ALF+N+L+DC+VY
Sbjct: 175 IRDSPGIRNKENDILTKNF-KCSQIGEFTLENLDSCEVRLIGCVNALFINRLKDCRVY 231


>ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 46/59 (77%)
 Frame = +3

Query: 147 SLESSNGFREKESEVLLREFQKDCEIGEFTLSKLNGCVVKLKGCLRALFVNKLRDCKVY 323
           S+  + GFR KE E+L+++F +  +IGEFT+S L+ C V+L GC+R +F+++L++C+V+
Sbjct: 174 SIPDTPGFRNKEGELLVKDF-RGSDIGEFTISDLDSCEVRLSGCVRTIFIHRLKNCRVF 231


>ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 46/59 (77%)
 Frame = +3

Query: 147 SLESSNGFREKESEVLLREFQKDCEIGEFTLSKLNGCVVKLKGCLRALFVNKLRDCKVY 323
           S+  + GFR KE E+L+++F +  +IGEFT+S L+ C V+L GC+R +F+++L++C+V+
Sbjct: 174 SIPDTPGFRNKEGELLVKDF-RGSDIGEFTISDLDSCEVRLSGCVRTIFIHRLKNCRVF 231


Top