BLASTX nr result

ID: Cephaelis21_contig00040164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040164
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   149   2e-34
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   149   2e-34
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]   149   2e-34
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|2...   142   5e-32

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = -1

Query: 559 KGFSASKDGNIVHWDVDNGKSEKYIWPSDEVLKSHRAKDP*GRAVKHSKHVLALAVSSDG 380
           KGFSASKDG IV WDVD+GK EKY+WP++EVLKSH AKDP GRA+KHSKHVLALAVSSDG
Sbjct: 178 KGFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDG 237

Query: 379 RYLASGGLDRHVHLWDIRTRQYIQ 308
           RYLASGG DRHVHLWD RTR++++
Sbjct: 238 RYLASGGFDRHVHLWDTRTREHLR 261


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = -1

Query: 559 KGFSASKDGNIVHWDVDNGKSEKYIWPSDEVLKSHRAKDP*GRAVKHSKHVLALAVSSDG 380
           KGFSASKDG IV WDVD+GK EKY+WP++EVLKSH AKDP GRA+KHSKHVLALAVSSDG
Sbjct: 178 KGFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDG 237

Query: 379 RYLASGGLDRHVHLWDIRTRQYIQ 308
           RYLASGG DRHVHLWD RTR++++
Sbjct: 238 RYLASGGFDRHVHLWDTRTREHLR 261


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = -1

Query: 559 KGFSASKDGNIVHWDVDNGKSEKYIWPSDEVLKSHRAKDP*GRAVKHSKHVLALAVSSDG 380
           KGFSASKDG IV WDVD+GK EKY+WP++EVLKSH AKDP GRA+KHSKHVLALAVSSDG
Sbjct: 178 KGFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDG 237

Query: 379 RYLASGGLDRHVHLWDIRTRQYIQ 308
           RYLASGG DRHVHLWD RTR++++
Sbjct: 238 RYLASGGFDRHVHLWDTRTREHLR 261


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = -1

Query: 559 KGFSASKDGNIVHWDVDNGKSEKYIWPSDEVLKSHRAKDP*GRAVKHSKHVLALAVSSDG 380
           KGFSASKDG I+HWDVD+GK+EKY WP+DE+L+SH AK+P GRA KHS++VLALAVS+DG
Sbjct: 175 KGFSASKDGTILHWDVDSGKAEKYQWPNDEILRSHGAKNPEGRATKHSRNVLALAVSTDG 234

Query: 379 RYLASGGLDRHVHLWDIRTRQYIQ 308
           RYLASGGLDRHVHLWD RTR++IQ
Sbjct: 235 RYLASGGLDRHVHLWDTRTREHIQ 258


>ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|222852806|gb|EEE90353.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  142 bits (357), Expect = 5e-32
 Identities = 62/84 (73%), Positives = 78/84 (92%)
 Frame = -1

Query: 559 KGFSASKDGNIVHWDVDNGKSEKYIWPSDEVLKSHRAKDP*GRAVKHSKHVLALAVSSDG 380
           KGFSASKDG I+HWDVD+GK+E+Y WP++E+L+SH +K+P GRA KHS++VLAL+VS+DG
Sbjct: 177 KGFSASKDGTILHWDVDSGKAERYQWPNEEILRSHGSKNPEGRATKHSRNVLALSVSTDG 236

Query: 379 RYLASGGLDRHVHLWDIRTRQYIQ 308
           RYLASGGLDRHVHLWD RTR++IQ
Sbjct: 237 RYLASGGLDRHVHLWDTRTREHIQ 260


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