BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040083
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...   152   2e-34
emb|CAN75283.1| hypothetical protein VITISV_029602 [Vitis vinifera]   139   3e-30
emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]   129   2e-27
emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]   127   6e-27
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   127   8e-27

>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score =  152 bits (384), Expect = 2e-34
 Identities = 118/407 (28%), Positives = 170/407 (41%), Gaps = 46/407 (11%)
 Frame = -3

Query: 1088 SVFVHGFCSDEARKPVWQDISNTLN-SGLPSIILGDFNAILSASEKRGRIPFQEKHYADF 912
            + FV+G    E R  +W  +++    S LP +++GDFN  L   E        E     F
Sbjct: 758  ATFVYGEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETLWQFEHFSLKQRSELQMQAF 817

Query: 911  HSFMPNNSLLVIGFSGSPYTWCNNRTHKDRIWKRLDRAMVDPLWLNSGIVSSVLHLARVG 732
               +    L  +GFSG PYT+ N R  +  +  RLDRA+ D  W   G+ S+   +A   
Sbjct: 818  RDVVQRCDLHDLGFSGVPYTYDNRREGRSNVKVRLDRALADDGW--RGLFSTAQTIAPSL 875

Query: 731  SDHAPLLVTHCRQTPPKHAFKFLNIWSSHPEYRSEIEKIWSTTIYADPINRLMIKLRNLK 552
            S   P+   H           +   W   P     I + W  +     ++ +   L  + 
Sbjct: 876  SSGNPVKCVH-----------YEIYWERDPAISEVIAESWGVSGVKQDLSDISQALFRMM 924

Query: 551  THLKKWSWSAFG*GRNKKSGIIDGRRPIRG------------------------------ 462
            + L+ W W A    +NK + + D    +                                
Sbjct: 925  SDLRTWMWRA---KKNKITKLRDSDDTVHSTTKELERMATEYFQRLFTADPSIDHSRVTS 981

Query: 461  --KHHSADA-----------EEICNAVFALNPNSAAGPDGFNGHFFHSAWNITAADVITA 321
              K    DA           EEI NA+F + P  A GPDGF G F+   W I   D++ A
Sbjct: 982  LMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRA 1041

Query: 320  VQHFFAGVELPWDCSSTLICLIPKSQNPALFSEYRPISLINFFNKVISKILANILESFLP 141
            VQ FF+   +P   + T I LIPK++ P    ++RPISL N   K++SK L N L   L 
Sbjct: 1042 VQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILD 1101

Query: 140  RLISSNQCGFIKGRKISDNILLAEELMCSL--NKKARGANEILKLDM 6
             L+S NQ  F+ GR I+DN L+A E    +  NK    A    KLD+
Sbjct: 1102 DLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDL 1148


>emb|CAN75283.1| hypothetical protein VITISV_029602 [Vitis vinifera]
          Length = 1773

 Score =  139 bits (349), Expect = 3e-30
 Identities = 105/366 (28%), Positives = 166/366 (45%), Gaps = 7/366 (1%)
 Frame = -3

Query: 1079 VHGFCSDEARKPVWQDISNTLNSGLPSIILG-DFNAILSASEKRGRIPFQEKHYADFHSF 903
            V+G  S   RK  W ++ +      P   +G DFN I  +SEK G          DF SF
Sbjct: 859  VYGPNSPSLRKDFWVELYDIYGLSFPLWCVGSDFNVIRRSSEKLGGSRLTSS-MRDFDSF 917

Query: 902  MPNNSLLVIGFSGSPYTWCNNRTHKDRIWKRLDRAMVDPLW---LNSGIVSSVLHLARVG 732
            +    LL      + +TW N    +  + KRLDR +   LW      G+  +++      
Sbjct: 918  IRECELLDPPLRNASFTWSN--LQESPVCKRLDRFLYSNLWGQLFPQGLQEALIQRT--- 972

Query: 731  SDHAPLLVTHCRQTPPKHAFKFLNIWSSHPEYRSEIEKIW-STTIYADPINRLMIKLRNL 555
            SDH P+ +           F+F N+W  HP ++      W          ++ M +L+++
Sbjct: 973  SDHWPIALDTNPFMWGPTPFRFENMWLQHPSFKENFRNWWRGFQGNRWESHKFMRRLQSV 1032

Query: 554  KTHLKKWSWSAFG*GRNKKSGIIDGRRPIRGKHHSADAEEICNAVFALNPNSAAGPDGFN 375
            K  LK+W+  +FG    KK      +  IR      + EEI  A+F L+ N A GPDGF 
Sbjct: 1033 KAKLKEWNKFSFGELNEKKK-----KSAIRLDSPFTE-EEISKAIFQLDRNKAPGPDGFT 1086

Query: 374  GHFFHSAWNITAADVITAVQHFFAGVELPWDCSSTLICLIPKSQNPALFSEYRPISLINF 195
               F   W++   D++     F     +    +++ I  +PK       S +RPISLI  
Sbjct: 1087 IAVFQDCWDVIKEDLVRVFXEFHRSXVINXSTNASFIVXLPKKSMTKKISNFRPISLITS 1146

Query: 194  FNKVISKILANILESFLPRLISSNQCGFIKGRKISDNILLAEELMCSLNKKARGANE--I 21
              K+I+K+L+  L   L   I S Q  F++GR+I D +L+A E+   ++++ R   E  +
Sbjct: 1147 LYKIIAKVLSGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEI---VDERRRSGEEGVV 1203

Query: 20   LKLDME 3
             K+D E
Sbjct: 1204 FKIDFE 1209


>emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]
          Length = 1302

 Score =  129 bits (325), Expect = 2e-27
 Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 20/379 (5%)
 Frame = -3

Query: 1079 VHGFCSDEARKPVWQDISNTLNSGL---PSIILGDFNAILSASEK--RGRIPFQEKHYAD 915
            V+G  S E R+ +W+++      GL   P  + GDFN ILS  E+  +GR+    + +A 
Sbjct: 395  VYGPFSKEDRECLWEELGAI--RGLWEDPWCLGGDFNVILSQRERNRQGRLTGAMRIFAQ 452

Query: 914  FHSFMPNNSLLVIGFSGSPYTWCNNRTHKDRIWKRLDRAMVDPLWLNSGIVSSVLHLARV 735
                +    LL +      +TW   R ++   W RLDR +V   WL      +   L R 
Sbjct: 453  T---VDELELLDLPMQEGAFTWSGGRNNQS--WARLDRFLVTQQWLEMFSGIAQCRLQRP 507

Query: 734  GSDHAPLLVTHCRQTPPKHAFKFLNIWSSHPEYRSEIEKIWSTTIYADPIN-RLMIKLRN 558
             SDH P+L+           F+F N+W     ++  +   W        ++ RL  KL+ 
Sbjct: 508  TSDHFPILLMGGGLRKGPTPFRFENMWLKVDGFKGLLRGWWQGIEVRGRVSFRLASKLKF 567

Query: 557  LKTHLKKWSWSAFG*GR-NKKSGI--------IDGRRPI-----RGKHHSADAEEICNAV 420
            LK  +K W+   FG    NK S +        ++  R +       K  + DA      +
Sbjct: 568  LKQKIKVWNREVFGRLEVNKNSALQQVEYWNGVESERSLSIAETEQKKEAKDAFHKWVLL 627

Query: 419  FALNPNSAAGPDGFNGHFFHSAWNITAADVITAVQHFFAGVELPWDCSSTLICLIPKSQN 240
              +  + A GPDGF   F+   W     +V+   + FF         ++T + LIPK   
Sbjct: 628  EEMRGDKAPGPDGFTMAFWQECWEFVKEEVVDLFKEFFEHGSFSKCLNTTFLVLIPKKGG 687

Query: 239  PALFSEYRPISLINFFNKVISKILANILESFLPRLISSNQCGFIKGRKISDNILLAEELM 60
                 ++RPISL+    K+++K+LAN L+  L R++S +Q  F++GR+I D  L+A E++
Sbjct: 688  AEDLGDFRPISLLGGLYKLLAKVLANRLKKVLDRVVSVDQNAFVRGRQILDASLVANEVI 747

Query: 59   CSLNKKARGANEILKLDME 3
               +K+ +    I KLD+E
Sbjct: 748  DYXHKR-KEKGLICKLDIE 765


>emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]
          Length = 1122

 Score =  127 bits (320), Expect = 6e-27
 Identities = 107/393 (27%), Positives = 169/393 (43%), Gaps = 34/393 (8%)
 Frame = -3

Query: 1079 VHGFCSDEARKPVWQDISNTLNSGL---PSIILGDFNAILSASEKRGRIPFQEKHYADFH 909
            V+G      R+P W+++      GL   P  I GDFN I   +E R R+         F 
Sbjct: 108  VYGPTMKRYREPFWEELGAI--RGLWSDPWCIGGDFNVIRFPNE-RSRVGRLSGSMRRFS 164

Query: 908  SFMPNNSLLVIGFSGSPYTWCNNRTHKDRIWKRLDRAMVDPLWLNSGIVSSVLHLARVGS 729
              +   +L  +   G PYTW      +     RLDR ++   W N     S   L R  S
Sbjct: 165  EVLDELALRXLPLQGGPYTWSGGLNGQSX--SRLDRFLISEDWENHFSGVSQCTLPRPVS 222

Query: 728  DHAPLLVTHCRQTPPKHAFKFLNIWSSHPEYRSEIEKIWSTTIYADPINRLMI-KLRNLK 552
            DH+P+L+           F+F N+W     ++  ++  W     +   + ++  KL+ LK
Sbjct: 223  DHSPILLDGGGVRRGPIPFRFENMWLKEERFKELLKGWWQGFNCSGSYSFVLSEKLKALK 282

Query: 551  THLKKWSWSAFG*------------------------------GRNKKSGIIDGRRPIRG 462
              LK W+   FG                                RN +   I GR     
Sbjct: 283  VKLKNWNKEVFGKVGVNLRMALGKVSFWDDQERQRTLNEQELEARNLEFDSI-GREEAAR 341

Query: 461  KHHSADAEEICNAVFALNPNSAAGPDGFNGHFFHSAWNITAADVITAVQHFFAGVELPWD 282
                   EE+  A+  LN + A GPDGF   F+   W+    +++   + FF   +    
Sbjct: 342  LEEMFSLEEVYLALSELNRDKAPGPDGFPIAFWQFCWDFVKDEIMGFFKDFFERGKFVRS 401

Query: 281  CSSTLICLIPKSQNPALFSEYRPISLINFFNKVISKILANILESFLPRLISSNQCGFIKG 102
             +ST + L+PK        +YRPISL+    K+++K+LAN L+  + +++SS+Q  F++G
Sbjct: 402  LNSTFLVLVPKKGGVKELRDYRPISLVGGLYKILAKVLANRLKKVVSKVVSSSQNAFVEG 461

Query: 101  RKISDNILLAEELMCSLNKKARGANEILKLDME 3
            R+I D  L+A E + S+  K   A  + KLD+E
Sbjct: 462  RQILDASLIANEAIDSM-LKGDEAGVLCKLDLE 493


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score =  127 bits (319), Expect = 8e-27
 Identities = 68/144 (47%), Positives = 91/144 (63%)
 Frame = -3

Query: 437 EICNAVFALNPNSAAGPDGFNGHFFHSAWNITAADVITAVQHFFAGVELPWDCSSTLICL 258
           E+ NAVF LN + A GP+GF GHF+ + W+I  ADVI +VQ FF   +L  + +S LI L
Sbjct: 446 EVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVL 505

Query: 257 IPKSQNPALFSEYRPISLINFFNKVISKILANILESFLPRLISSNQCGFIKGRKISDNIL 78
           IPK     +  +YRPI+L NF  K+ISKILA+ L     R+IS  Q GFI+ R IS  ++
Sbjct: 506 IPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRGFIRDRDISKCVI 565

Query: 77  LAEELMCSLNKKARGANEILKLDM 6
           LA E +  L K+  G N  LK+D+
Sbjct: 566 LASEAINLLEKRQYGGNVALKVDI 589



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1052 RKPVWQDISNTLNSGL-PSIILGDFNAILSASEKRGRIPFQEKHYADFHSFMPNNSLLVI 876
            R+ +W +++N       P + +GDFNA+L A EKR R P       DF ++   N L  +
Sbjct: 114  RRQLWAELTNLQGCFQGPWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHL 173

Query: 875  GFSGSPYTWCNNRTHKDRIWKRLDRAMVDPLWLNSGIVSSV-----LHLARVGSDHAPLL 711
               G+ YTW N R   D +  RLDRA+ +  W+N    SS        L R  SDH PLL
Sbjct: 174  PTLGAFYTWSNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLL 233

Query: 710  VTHCRQTPPKHA-FKFLNIWSSHPEYRSEIEKIWSTTIYADPINRLMIKLRNLKTHLKKW 534
            ++    T  +   FKF   W+ H + R  + + WS       + RL  KL+++K   + W
Sbjct: 234  MSMDFCTSQRSGNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHW 293

Query: 533  SWSAFG 516
            + + FG
Sbjct: 294  NRTVFG 299