BLASTX nr result

ID: Cephaelis21_contig00040077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040077
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   187   6e-46
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   178   4e-43
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   176   2e-42
ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      175   3e-42

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/110 (77%), Positives = 104/110 (94%)
 Frame = +2

Query: 5   LVEAGHFPVLAVKAGKVNDFTGKSIGTVSSTQIFIDPDYPEARSLRDWFDRGGKDVASQS 184
           ++++G FPVLAVK+GKVNDF+GKS+GT+S+TQ+FI+PD+ EA +LR+WFDRGGK+ ASQS
Sbjct: 370 MIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDRGGKNAASQS 429

Query: 185 ISREIMPGGSKNEVRKFVSQIKDEGLGRSDKPDWITVKATISFIKTDTFC 334
           ISR+IMP GS+NE+RK VSQIKDEGLGRSDKPDW+TVKATISFIKTDTFC
Sbjct: 430 ISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKATISFIKTDTFC 479


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  178 bits (452), Expect = 4e-43
 Identities = 81/110 (73%), Positives = 99/110 (90%)
 Frame = +2

Query: 5   LVEAGHFPVLAVKAGKVNDFTGKSIGTVSSTQIFIDPDYPEARSLRDWFDRGGKDVASQS 184
           +V++G FPVLAVKAGKV+DF+GKS+GT+SSTQ+FI+PD PEA  L+DWFDRGG+  AS S
Sbjct: 416 IVDSGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVS 475

Query: 185 ISREIMPGGSKNEVRKFVSQIKDEGLGRSDKPDWITVKATISFIKTDTFC 334
           ISR+I+PGGSKNE+RK VSQIK EGLGRSD+PDW+TV A I+F+KTDTFC
Sbjct: 476 ISRDILPGGSKNEIRKTVSQIKHEGLGRSDRPDWVTVSARITFVKTDTFC 525


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/111 (74%), Positives = 99/111 (89%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   LVEAGHFPVLAVKAGKVNDFTGKSIGTVSSTQIFIDPDYPEARSLRDWFDRGGKDVASQS 184
           +V++   PVLA+KAGKV+DF+GKS+GT+SSTQ+FI+PD+PEA  LR WFD GGKD AS S
Sbjct: 389 MVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDHGGKDTASFS 448

Query: 185 ISREIMPGG-SKNEVRKFVSQIKDEGLGRSDKPDWITVKATISFIKTDTFC 334
           ISR+ MPGG S+NE+RK VSQIK+EGLGRSDKPDWITVKATISFIKTD+FC
Sbjct: 449 ISRDTMPGGVSRNEIRKSVSQIKEEGLGRSDKPDWITVKATISFIKTDSFC 499


>ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|222872439|gb|EEF09570.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  175 bits (444), Expect = 3e-42
 Identities = 80/110 (72%), Positives = 98/110 (89%)
 Frame = +2

Query: 5   LVEAGHFPVLAVKAGKVNDFTGKSIGTVSSTQIFIDPDYPEARSLRDWFDRGGKDVASQS 184
           +V++G FP+LAVKAGKV+DF GKS+GT+SSTQ+FI+PD PEA + +DWFDRGG+DVAS S
Sbjct: 308 MVDSGFFPILAVKAGKVSDFNGKSLGTISSTQLFINPDIPEAHAAKDWFDRGGRDVASMS 367

Query: 185 ISREIMPGGSKNEVRKFVSQIKDEGLGRSDKPDWITVKATISFIKTDTFC 334
           IS++I  GG KNEVRK VSQ+K EGLGRSDKPDW TV+A++SFIKTDTFC
Sbjct: 368 ISKDIAQGGPKNEVRKTVSQVKLEGLGRSDKPDWATVRASVSFIKTDTFC 417


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/110 (73%), Positives = 101/110 (91%)
 Frame = +2

Query: 5   LVEAGHFPVLAVKAGKVNDFTGKSIGTVSSTQIFIDPDYPEARSLRDWFDRGGKDVASQS 184
           +V+AG FP+LAVKAGKVN+F+GKSIG++S+TQ+FI+PD+PEA+SLR WFD+ GKD AS S
Sbjct: 383 MVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKDSASLS 442

Query: 185 ISREIMPGGSKNEVRKFVSQIKDEGLGRSDKPDWITVKATISFIKTDTFC 334
           IS++I  GG KNE+RK VSQI+DEGLGRSDKPDWIT++ATISF+KTDTFC
Sbjct: 443 ISKDITHGGPKNEIRKTVSQIRDEGLGRSDKPDWITIRATISFMKTDTFC 492


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