BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040023
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    93   6e-17
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    78   2e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    78   2e-12
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   8e-12
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   1e-11

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
 Frame = -1

Query: 619 FWNVRGIGSVFSLWRLKMLSRIHTHTFIVLFEPMLDCNKIDEVKSRLGF----LQCPFNT 452
           FWN +G+G   ++ RL+ + R++    + L E     N   ++  ++GF    +  P   
Sbjct: 367 FWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCIISPRGL 426

Query: 451 SNKVWVFFRHGFSLQMKDSSNQFLHLEVHDGSVLFMGFVTVVYGKSTRAAWVGLWSDLAR 272
           S  + V+++   S+Q+     + + L V   +  F  +++ +YG    +    LW  L R
Sbjct: 427 SGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNF--YLSCIYGHPIPSERHHLWEKLQR 484

Query: 271 LHSTCSAIPWLVGGDFNAIVFVDEYKGRSSPNLGSIQDFQQAI*DCELLELPCTGGSYTW 92
           + +  S  PW++ GDFN I+ ++E KG    ++GS+Q+F   I  C + +L   G  Y+W
Sbjct: 485 VSAHRSG-PWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSW 543

Query: 91  TSMRSNSRVWKRLDRLLVNSHW 26
              R N  +   LDR+ +NS W
Sbjct: 544 VGKRQNETIESCLDRVFINSDW 565


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
 Frame = -1

Query: 616 WNVRGIGSVFSLWRLKMLSRIHTHTFIVLFEPMLDCNKIDEVKSRLGF-----LQCPFNT 452
           WN RG+G+  ++  L  +++     FI L E ++   +++++KS+LGF     +      
Sbjct: 312 WNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGRG 371

Query: 451 SNKVWVFFRHG-FSLQMKDSSNQFLHLEVHDGSVLFMGFVTVVYGKSTRAAWVGLWSDLA 275
               +++ + G FSL     S+  + +   DG       VT  YG   R+     W+ L 
Sbjct: 372 GGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDG---LQWRVTGFYGFPDRSQRHLSWNLLR 428

Query: 274 RLHSTCSAIPWLVGGDFNAIVFVDEYKGRSSPNLGSIQDFQQAI*DCELLELPCTGGSYT 95
            L+S  S++PW   GDFN IV  +E +G        I+ F  A+ DC+L +L   G  +T
Sbjct: 429 SLYSA-SSLPWCCLGDFNDIVCNEEKRGSVPHPPWLIRGFCAALSDCQLQDLXLKGYPFT 487

Query: 94  WTSMRSNSR-VWKRLDRLLVNSHWLH 20
           W   R +S  V + LDR LVN  WL+
Sbjct: 488 WERGRGSSHWVEEXLDRALVNVSWLN 513


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
 Frame = -1

Query: 631 IKCLFWNVRGIGSVFSLWRLKMLSRIHTHTFIVLFEPMLDCNKIDEVKSRLGFLQC---- 464
           ++ L WN +G+G+  ++  L+ +  ++    I L E     N ++ V   LGF       
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 463 PFNTSNKVWVFFRHGFSLQMKDSSNQFLHLEVHDGSVLFMG---FVTVVYGKSTRAAWVG 293
           P   S  + + ++    +++  S  + +     D  +++     ++T +YG+  +A    
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLI-----DALLIWQDKEFYLTCIYGEPVQAERGE 115

Query: 292 LWSDLARLHSTCSAIPWLVGGDFNAIVFVDEYKGRSSPNLGSIQDFQQAI*DCELLELPC 113
           LW  L RL  + S  PW++ GDFN +V   E  G  +    S  +F+Q +  C L E+  
Sbjct: 116 LWERLTRLGLSRSG-PWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNH 174

Query: 112 TGGSYTWTSMRSNSRVWKRLDRLLVNSHWL 23
           +G  ++W   R++  V  RLDR + N  W+
Sbjct: 175 SGYQFSWYGNRNDELVQCRLDRTVANQAWM 204


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
 Frame = -1

Query: 631 IKCLFWNVRGIGSVFSLWRLKMLSRIHTHTFIVLFEPMLDCNKIDEVKSRLGFLQC---- 464
           +K + WNVRG  S   LW    L ++H    ++L E      + D+   RLG++      
Sbjct: 1   MKAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIP 60

Query: 463 PFNTSNKVWVFFRHGFSL-QMKDSSNQFLHLEVHDGSVLFMGFVTVVYGKSTRAAWVGLW 287
            F     +W+ ++   +L    D      H      S +    +T ++  S  +     W
Sbjct: 61  AFGKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYW 120

Query: 286 SDLARLHSTCSAIPWLVGGDFNAIVFVDEYKGRSSPNLGSIQDFQQAI*DCELLELPCTG 107
            DL    S     PWLV GD N ++  +E  G         +  +  I    LL+L   G
Sbjct: 121 VDLTE-DSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQG 179

Query: 106 GSYTWTSMRS-NSRVWKRLDRLLVNSHWL 23
             +TWT+ R+  S + +RLDR LVNS WL
Sbjct: 180 PKFTWTNGRTGGSLIKERLDRALVNSEWL 208


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
 Frame = -1

Query: 631 IKCLFWNVRGIGSVFSLWRLKMLSRIHTHTFIVLFEPMLDCNKIDEVKSRLGF-----LQ 467
           +K L WN +G+G+ +++ +L+ L   +T   + + E  +  N +++ K  LGF     + 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 466 CPFNTSNKVWVFFRHGFSLQMKDSSNQFLHLEVHDGSVLFMGFVTVVYGKSTRAAWVGLW 287
           C          +     S +M   S   +  +V     +   FV + YG          W
Sbjct: 61  CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVRWRFVGI-YG----------W 109

Query: 286 SDLARLHSTCSAI---------PWLVGGDFNAIVFVDEYKGRSSPNLGSIQDFQQAI*DC 134
            +    H T + I         P + GGDFN I+  DE +G +S    +I  F+  + DC
Sbjct: 110 PEEENKHKTWALIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDC 169

Query: 133 ELLELPCTGGSYTWTSMRS-NSRVWKRLDRLLVNSHWLH 20
            L +L   G  +TW   RS  SR+ +RLDR +V+  WLH
Sbjct: 170 SLGDLRFVGQWHTWERGRSPESRIRERLDRFIVSRSWLH 208