BLASTX nr result

ID: Cephaelis21_contig00039391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039391
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    79   3e-13
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   4e-11
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   5e-10
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    60   1e-07
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    59   3e-07

>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 31/67 (46%), Positives = 50/67 (74%)
 Frame = +1

Query: 193 WNVRGAGSPRFPSVFREYVRLYKPSLVILVETRISGNRADKVIKKLGYNSSHRVEARGFA 372
           WN RGAG  +F    ++ ++L++PS+V+L+E +ISG  AD+VIK++G++  + ++  GFA
Sbjct: 672 WNCRGAGELKFMRAIKDLIKLHEPSIVVLLEPKISGGDADQVIKEIGFSGQYHIDPEGFA 731

Query: 373 GGIWILW 393
            GIWILW
Sbjct: 732 HGIWILW 738


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/73 (42%), Positives = 49/73 (67%)
 Frame = +1

Query: 175 SFNAFVWNVRGAGSPRFPSVFREYVRLYKPSLVILVETRISGNRADKVIKKLGYNSSHRV 354
           S    VWNV+G G+    ++ RE +R+  P+++ LVET ISG++A ++  ++G++   RV
Sbjct: 2   SIKIMVWNVQGVGTKL--TILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRV 59

Query: 355 EARGFAGGIWILW 393
           EA GF GGIW+ W
Sbjct: 60  EAEGFRGGIWLFW 72


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/70 (45%), Positives = 46/70 (65%)
 Frame = +1

Query: 184 AFVWNVRGAGSPRFPSVFREYVRLYKPSLVILVETRISGNRADKVIKKLGYNSSHRVEAR 363
           A +WNVRGA S  F     + V+++KP L+IL+ET+ S  RAD+  K+LGY +   + A 
Sbjct: 3   AIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIPAF 62

Query: 364 GFAGGIWILW 393
           G  GGIW++W
Sbjct: 63  GKRGGIWLMW 72


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = +1

Query: 181 NAFVWNVRGAGSPRFPSVFREYVRLYKPSLVILVETRISGNRADKVIKKLGYNSSHRVEA 360
           N  +WN RGA  P F    R  ++ +   ++ L ET   G+R  +  + LG+ +S RV+ 
Sbjct: 2   NCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVDV 61

Query: 361 RGFAGGIWILW 393
            G +GG+W+LW
Sbjct: 62  VGQSGGLWLLW 72


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = +1

Query: 181 NAFVWNVRGAGSPRFPSVFREYVRLYKPSLVILVETRISGNRADKVIKKLGYNSSHRVEA 360
           N  +WN RG   P F    R  ++ +   ++ L ET   G+RA ++ ++LG+ +  RV+A
Sbjct: 509 NCLLWNCRGPNKPIFRRSIRYVLKKFDTDVLALFETHAGGDRAGRICQRLGFENQFRVDA 568

Query: 361 RGFAGGIWILW 393
            G + G+W+LW
Sbjct: 569 VGQSSGLWLLW 579


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