BLASTX nr result

ID: Cephaelis21_contig00039336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039336
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    82   2e-13
gb|ABI34321.1| RNase H family protein [Solanum demissum]               68   4e-09

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
 Frame = +2

Query: 152  GGGILRDPTGHLIFAFSSFFGRGSNMCAETLSLFVGISLCAKMQLNNLVDRCDSKALVDM 331
            GGGILR+  G +I AF+   G G++  AE +S+  G+ LC +  +N ++   DS  L   
Sbjct: 1015 GGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGVNMIIGETDSILLAKA 1074

Query: 332  VNQQAKVPWNIRPLVRKISRYKHLISD----VKHCYREANSVADSLTKEAQSHRQTKIFN 499
            + +   +PW +   V+KI +   ++ +    + HC REAN  AD L   + S     +F 
Sbjct: 1075 ITENWSIPWRMYIPVKKIQK---MVEEHGFIINHCLREANQPADKLASISLSTDVNHVFK 1131

Query: 500  SFSQISQPVRALMLMDSWNVCNFK 571
            S++ +   V+ L+ +D  N+  F+
Sbjct: 1132 SYANLPSLVKGLVNLDRMNLPTFR 1155


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
 Frame = +2

Query: 137  SCSASGGGILRDPTGHLIFAFSSFFGRGSNMCAETLSLFVGISLCAKMQLNNLVDRCDSK 316
            S +A  G I+RD T  +I AFS      SN  AE L+   GI  C +   +N     DSK
Sbjct: 765  SGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSK 824

Query: 317  ALVDMVNQQAKVPWNIRPLVRKISR-YKHLISDVKHCYREANSVADSLTKEAQSHRQTKI 493
             +VDMV         I+ +V  I +    +  +V HCYREAN VAD+L K A    +  +
Sbjct: 825  LVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNEAHM 884

Query: 494  FNSFSQI 514
            ++ +  I
Sbjct: 885  YHDWRDI 891


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