BLASTX nr result

ID: Cephaelis21_contig00038783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038783
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139416.1| PREDICTED: probable polygalacturonase At1g80...    68   7e-10
ref|XP_002266960.1| PREDICTED: probable polygalacturonase At3g15...    67   2e-09
ref|NP_001234200.1| polygalacturonase [Solanum lycopersicum] gi|...    64   2e-08
ref|XP_002329026.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
dbj|BAJ53225.1| JHL06P13.4 [Jatropha curcas]                           63   2e-08

>ref|XP_004139416.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
           sativus] gi|449493697|ref|XP_004159417.1| PREDICTED:
           probable polygalacturonase At1g80170-like [Cucumis
           sativus]
          Length = 290

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   GVKISNVTYTTMSGTSSSRIAINLNCSRSVPCS-EILLQSIHLAAATAGKEVTASCANAH 178
           GV I+NV+   + GTS S +AINLNCSRSV C+  ILL+SI L +  +G++VT+ C  AH
Sbjct: 216 GVHIANVSIKNLFGTSMSNVAINLNCSRSVACTGSILLKSIQLQSVNSGQKVTSGCIIAH 275

Query: 179 GQEIDVV-PGHCL 214
           G    VV P  CL
Sbjct: 276 GFAFGVVQPKPCL 288


>ref|XP_002266960.1| PREDICTED: probable polygalacturonase At3g15720 [Vitis vinifera]
           gi|297743436|emb|CBI36303.3| unnamed protein product
           [Vitis vinifera]
          Length = 391

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/74 (43%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   GVKISNVTYTTMSGTSSSRIAINLNCSRSVPCSEILLQSIHLAAATAGKEVTASCANAHG 181
           GVK+S++++T + GT++++ AINL+CS+SV C+ ILL  +++ +A +   V++ C NAHG
Sbjct: 318 GVKLSDISFTRVIGTTTTKNAINLSCSKSVACTNILLNHVNIKSAYSEDVVSSYCINAHG 377

Query: 182 QEIDVVPG-HCLLD 220
           +  D VP   CLL+
Sbjct: 378 RFSDSVPPVDCLLN 391


>ref|NP_001234200.1| polygalacturonase [Solanum lycopersicum] gi|4325090|gb|AAD17250.1|
           polygalacturonase [Solanum lycopersicum]
          Length = 367

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/66 (40%), Positives = 44/66 (66%)
 Frame = +2

Query: 5   VKISNVTYTTMSGTSSSRIAINLNCSRSVPCSEILLQSIHLAAATAGKEVTASCANAHGQ 184
           VK+SNVTY  + GT+SS++AI +NCS S  C+ + L++I++ +   GK++ A+C N  G+
Sbjct: 295 VKVSNVTYKKIYGTTSSKLAIKMNCSNSTACTNVELENIYITSVEPGKKIFATCNNVKGK 354

Query: 185 EIDVVP 202
                P
Sbjct: 355 AFSNSP 360


>ref|XP_002329026.1| predicted protein [Populus trichocarpa] gi|222839697|gb|EEE78020.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   GVKISNVTYTTMSGTSSSRIAINLNCSRSVPCSEILLQSIHLAAATAGKEVTASCANAHG 181
           GV IS+V+Y+   GT+ + +AIN NCS SV C+ I L +I L ++  G+++++ C NAHG
Sbjct: 251 GVHISDVSYSRAQGTAKTAVAINFNCSSSVACTNITLDNIQLKSSIRGQQLSSFCNNAHG 310

Query: 182 QEIDVV-PGHCL 214
               +V P  CL
Sbjct: 311 ITKGIVYPKSCL 322


>dbj|BAJ53225.1| JHL06P13.4 [Jatropha curcas]
          Length = 380

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   GVKISNVTYTTMSGTSSSRIAINLNCSRSVPCSEILLQSIHLAAATAGKEVTASCANAHG 181
           GV IS+V +    GTS S++AI+LNCS +VPC+ + L +I L  A +G EVT++C NA G
Sbjct: 303 GVHISDVQFFGFFGTSKSKVAIDLNCSENVPCTNLSLGNIRLGPAESG-EVTSTCNNAFG 361

Query: 182 QEIDVV-PGHCL 214
               VV P  CL
Sbjct: 362 STYGVVRPKSCL 373


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