BLASTX nr result

ID: Cephaelis21_contig00038489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038489
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   159   6e-37
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   158   1e-36
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   153   6e-35
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-31

>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  159 bits (403), Expect = 6e-37
 Identities = 91/158 (57%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
 Frame = -1

Query: 465 PPKKFSYSRAIPSLRWPHLNFTDTHQSPFT---IASPNASKPLIDDDDGGSFTLAPRSNS 295
           P KKFSYSRA PS+RWPHL  +D+  SP T   IASP+ ++   +  +  S   +P+  +
Sbjct: 13  PSKKFSYSRASPSIRWPHLKLSDSCTSPHTQFHIASPSPTQFFDEMPESESDNKSPKLGA 72

Query: 294 VLGEGAETGDAYDNEQVEDLRGKPNRNRTRVKKMNKLALKRAKDWRERVQFLTHQILGLN 115
           +  E  E     D+E  E L      +RTRVKKMNKLALKRAKDWRERV+FLT +ILGL 
Sbjct: 73  L--ESVEV----DDESQERLG---RLSRTRVKKMNKLALKRAKDWRERVKFLTDRILGLR 123

Query: 114 PEQHVADVLDEKMVQMTPTDFCFVVKLVGQSVWQRALE 1
           P+Q VADVLD+  VQMTPTDFCFVVK VGQ  WQRALE
Sbjct: 124 PDQFVADVLDDSKVQMTPTDFCFVVKWVGQENWQRALE 161


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  158 bits (400), Expect = 1e-36
 Identities = 88/166 (53%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
 Frame = -1

Query: 492 NDGPETTPPPPKKFSYSRAIPSLRWPHLNFTDTHQSPFTIASPNASKPLIDD--DDGGSF 319
           N  P ++    KKFSYSRA PS+RWPHL  T+ +              L++D  D  G  
Sbjct: 15  NSDPSSSSSSSKKFSYSRASPSVRWPHLKLTENYPPSQRPTHVVEDVGLLEDTHDSLGKE 74

Query: 318 TLAPRSNSVLGEGAETGDAYDNEQVEDLRGKPNRNRTRVKKMNKLALKRAKDWRERVQFL 139
            +     +  GEG E GD     + +D  GK ++NR  VKKM KLALKRAKDWR+RVQFL
Sbjct: 75  EIREIGEAGFGEGLELGD-----ETQDFLGKTSKNR--VKKMTKLALKRAKDWRQRVQFL 127

Query: 138 THQILGLNPEQHVADVLDEKMVQMTPTDFCFVVKLVGQSVWQRALE 1
           T +ILGL  E+ VADVLD++ VQMTPTDFCFVVK VGQS WQRALE
Sbjct: 128 TDRILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALE 173


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  153 bits (386), Expect = 6e-35
 Identities = 85/155 (54%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
 Frame = -1

Query: 459 KKFSYSRAIPSLRWPHLNFTDTHQSPFTIASPNASKPLIDD--DDGGSFTLAPRSNSVLG 286
           +KFSYSRA PS+RWPHL  T+ +              L++D  D  G   +     +  G
Sbjct: 58  QKFSYSRASPSVRWPHLKLTENYPPSQRPTHVVEDVGLLEDTHDSLGKEEIREIGEAGFG 117

Query: 285 EGAETGDAYDNEQVEDLRGKPNRNRTRVKKMNKLALKRAKDWRERVQFLTHQILGLNPEQ 106
           EG E GD     + +D  GK ++NR  VKKM KLALKRAKDWR+RVQFLT +ILGL  E+
Sbjct: 118 EGLELGD-----ETQDFLGKTSKNR--VKKMTKLALKRAKDWRQRVQFLTDRILGLKSEE 170

Query: 105 HVADVLDEKMVQMTPTDFCFVVKLVGQSVWQRALE 1
            VADVLD++ VQMTPTDFCFVVK VGQS WQRALE
Sbjct: 171 FVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALE 205


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  148 bits (374), Expect = 1e-33
 Identities = 79/165 (47%), Positives = 106/165 (64%), Gaps = 1/165 (0%)
 Frame = -1

Query: 492 NDGPETTPPPPKKFSYSRAIPSLRWPHLNFTDT-HQSPFTIASPNASKPLIDDDDGGSFT 316
           N+  + +   P+KFSYSRA PS+RWP L   +T H SP T  +  +   +++       T
Sbjct: 41  NNSTDCSDNAPQKFSYSRASPSVRWPQLKLNETYHSSPQTQFTEMSKDGILNHSSLDQLT 100

Query: 315 LAPRSNSVLGEGAETGDAYDNEQVEDLRGKPNRNRTRVKKMNKLALKRAKDWRERVQFLT 136
              +   +     E  D  D++  ++ + +  ++RTRVKKMNKLALKRAKDWRERV++LT
Sbjct: 101 EMSKDEILDVGSFELSDDDDDDGSQEEKLRWRKSRTRVKKMNKLALKRAKDWRERVKYLT 160

Query: 135 HQILGLNPEQHVADVLDEKMVQMTPTDFCFVVKLVGQSVWQRALE 1
            +ILGL  +Q VADVLD++ VQMTPTD CFVVK VGQ  W RALE
Sbjct: 161 DRILGLTQDQFVADVLDDRKVQMTPTDLCFVVKSVGQESWHRALE 205


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
           predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  139 bits (350), Expect = 9e-31
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
 Frame = -1

Query: 462 PKKFSYSRAIPSLRWPHLNFTDTHQSPFTIASPNASKPLIDDDDGGSFTLAPRSNSVLGE 283
           P+KFSYSRA PS+RWP L   +T+       S   SK    +    +       + +LG 
Sbjct: 51  PQKFSYSRASPSVRWPQLKLNETYYPSSQTQSTEMSKDGNLNHSSHNQLAEMSKDGILGV 110

Query: 282 GA----ETGDAYDNEQVEDLRGKPNRNRTRVKKMNKLALKRAKDWRERVQFLTHQILGLN 115
           G+    +  D  D+   E+  G   ++RTRVKKMNKLAL++AKDWRERV++ T +ILGL 
Sbjct: 111 GSPELNDDVDVDDDGNEEEKLGW-RQSRTRVKKMNKLALRKAKDWRERVKYFTDRILGLK 169

Query: 114 PEQHVADVLDEKMVQMTPTDFCFVVKLVGQSVWQRALE 1
            +Q VADVLD++ VQMTPTDFCFVVK VGQ  W RA E
Sbjct: 170 QDQFVADVLDDRKVQMTPTDFCFVVKSVGQESWHRAFE 207


Top