BLASTX nr result

ID: Cephaelis21_contig00038427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038427
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]   152   3e-35
ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. ...   151   5e-35
ref|NP_001119013.1| pentatricopeptide repeat-containing protein ...   150   8e-35
emb|CAA16708.1| putatative protein [Arabidopsis thaliana] gi|726...   150   8e-35

>ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
           gi|296082485|emb|CBI21490.3| unnamed protein product
           [Vitis vinifera]
          Length = 637

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +2

Query: 2   LKPNSVTFIAVLQACVHAGLLEKGWEFLDMMIGQYKIDATLDHHACMADLLARRGKLKEA 181
           LKPN +TF+AVLQAC HAG LEKGWE  ++M   YKI+  LDH++CMADLL R+G+LKEA
Sbjct: 456 LKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEA 515

Query: 182 LHYIESMPCRRDASIWGALLSACKIHRNSDIGQYAADRLFELEPQAAAPYVEMA 343
             +I++MP + D  IW  LLSACKIH+N  IG+  A  LFELEPQ A PYV+MA
Sbjct: 516 FEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMA 569


>emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +2

Query: 2   LKPNSVTFIAVLQACVHAGLLEKGWEFLDMMIGQYKIDATLDHHACMADLLARRGKLKEA 181
           LKPN +TF+AVLQAC HAG LEKGWE  ++M   YKI+  LDH++CMADLL R+G+LKEA
Sbjct: 456 LKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEA 515

Query: 182 LHYIESMPCRRDASIWGALLSACKIHRNSDIGQYAADRLFELEPQAAAPYVEMA 343
             +I++MP + D  IW  LLSACKIH+N  IG+  A  LFELEPQ A PYV+MA
Sbjct: 516 FEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMA 569


>ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1251

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/113 (63%), Positives = 84/113 (74%)
 Frame = +2

Query: 5    KPNSVTFIAVLQACVHAGLLEKGWEFLDMMIGQYKIDATLDHHACMADLLARRGKLKEAL 184
            KPN +TF+AVLQAC H+G LEKGWE+  +M   Y I   LDH++CM DLL R+GKL EAL
Sbjct: 1052 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEAL 1111

Query: 185  HYIESMPCRRDASIWGALLSACKIHRNSDIGQYAADRLFELEPQAAAPYVEMA 343
              I +M  + DA IWGALLSACKIHRN  I + AAD LF LEPQ AAPYVEM+
Sbjct: 1112 ELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLEPQMAAPYVEMS 1164


>ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
           gi|332658758|gb|AEE84158.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 5   KPNSVTFIAVLQACVHAGLLEKGWEFLDMMIGQYKIDATLDHHACMADLLARRGKLKEAL 184
           KPN +TF+AVLQAC H+G LEKGWE+  +M   Y I   LDH++CM DLL R+GKL+EAL
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 515

Query: 185 HYIESMPCRRDASIWGALLSACKIHRNSDIGQYAADRLFELEPQAAAPYVEMA 343
             I +M  + DA IWGALL+ACKIHRN  I + AA+ LF LEPQ AAPYVEMA
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568


>emb|CAA16708.1| putatative protein [Arabidopsis thaliana] gi|7268714|emb|CAB78921.1|
            putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 5    KPNSVTFIAVLQACVHAGLLEKGWEFLDMMIGQYKIDATLDHHACMADLLARRGKLKEAL 184
            KPN +TF+AVLQAC H+G LEKGWE+  +M   Y I   LDH++CM DLL R+GKL+EAL
Sbjct: 1062 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 1121

Query: 185  HYIESMPCRRDASIWGALLSACKIHRNSDIGQYAADRLFELEPQAAAPYVEMA 343
              I +M  + DA IWGALL+ACKIHRN  I + AA+ LF LEPQ AAPYVEMA
Sbjct: 1122 ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 1174


Top