BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036806
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   218   6e-55
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   216   4e-54
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   208   6e-52
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  218 bits (556), Expect = 6e-55
 Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 3/209 (1%)
 Frame = -3

Query: 630 SAPRRAPRWVSTRRFFEQSLADLHSCTHLTHLCQLLPLILKSDLHRDNVVGTKLVSAFSH 451
           S P R P WVS RR  EQ ++DLH C+ L  + Q+   +LK++LHR++ VG KL++AFS 
Sbjct: 2   SVPIRNPTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSL 61

Query: 450 CRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQMQNHGVRPNIFTYPFL 271
           CRQM  A+++F+ IQ PDV  YN LIRA++ +S+P      F +MQ+ GV  + FTYPFL
Sbjct: 62  CRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFL 121

Query: 270 LKARMG---LEFVTAVHALIEKCGFSDDVLAPNSLIDAYSQCGLMGVSAAKKLFDVMGWR 100
           LKA  G   +  V  +HA +EK GF  D+  PNSLID+Y +CGL GV+AA+K+F+VM  R
Sbjct: 122 LKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAER 181

Query: 99  DNVSWNCMISGLVKAGQLKKAR*LFDECP 13
           D VSWN MI GLVK G+L +AR LFDE P
Sbjct: 182 DTVSWNSMIGGLVKVGELGEARRLFDEMP 210



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
 Frame = -3

Query: 495 RDNVVGTKLVSAFSHCRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQM 316
           R+ V  + +V  +S    M  A  +F  +   ++  + ++I  Y         +  ++QM
Sbjct: 243 RNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQM 302

Query: 315 QNHGVRPNIFTYPFLLKA-----RMGLEFVTAVHALIEKCGFSDDVLAPNSLIDAYSQCG 151
           +  G++ +  T   +L A      +GL     VHA IE+  F       N+LID Y++CG
Sbjct: 303 EEAGLKFDDGTVISILSACAVSGLLGLG--KRVHASIERTRFKCSTPVSNALIDMYAKCG 360

Query: 150 LMGVSAAKKLFDVMGWRDNVSWNCMISGLVKAGQLKKAR*LF 25
              +  A  +F  M  +D VSWN +I GL   G  +KA  LF
Sbjct: 361 --SLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLF 400


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  216 bits (549), Expect = 4e-54
 Identities = 111/207 (53%), Positives = 139/207 (67%), Gaps = 3/207 (1%)
 Frame = -3

Query: 630 SAPRRAPRWVSTRRFFEQSLADLHSCTHLTHLCQLLPLILKSDLHRDNVVGTKLVSAFSH 451
           S P RAP WVSTRR FE+ L DLH CT   H+ ++   I+K +LH D  V  KL+SAFS 
Sbjct: 8   SLPTRAPTWVSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSL 67

Query: 450 CRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQMQNHGVRPNIFTYPFL 271
           C QM  A+++F+ IQ P+VH YN LIRA++ +SQ  +    F  MQ +G+  + FTYPFL
Sbjct: 68  CHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFL 127

Query: 270 LKARMG---LEFVTAVHALIEKCGFSDDVLAPNSLIDAYSQCGLMGVSAAKKLFDVMGWR 100
           LKA  G   L  V  +H  +EK GF  D+  PNSLID+YS+CGL+GV+ A KLF  MG +
Sbjct: 128 LKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEK 187

Query: 99  DNVSWNCMISGLVKAGQLKKAR*LFDE 19
           D VSWN MI GLVKAG L +AR LFDE
Sbjct: 188 DLVSWNSMIGGLVKAGDLGRARKLFDE 214



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
 Frame = -3

Query: 495 RDNVVGTKLVSAFSHCRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQM 316
           R+ V  + +VS +     M  A  +F  +   ++  + ++I  +       +    ++QM
Sbjct: 249 RNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQM 308

Query: 315 QNHGVRPNIFTYPFLLKA--RMGLEFV-TAVHALIEKCGFSDDVLAPNSLIDAYSQCGLM 145
           +  G++P+  T   +L A    GL  +   VHA I+K      V   N+L+D Y++CG  
Sbjct: 309 EAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGR- 367

Query: 144 GVSAAKKLFDVMGWRDNVSWNCMISGLVKAGQLKKAR*LFDE 19
            V  A  +F+ M  RD VSWNCM+ GL   G  +KA  LF +
Sbjct: 368 -VDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSK 408


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  208 bits (530), Expect = 6e-52
 Identities = 109/212 (51%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
 Frame = -3

Query: 639 MLKSAPRRAPRWVSTRRFFEQSLADLHSCTHLTHLCQLLPLILKSDLHRDNVVGTKLVSA 460
           M  S P RAP WVS+RR FE+ L DL  C +L  + QL   I++ +LH+D  +  KL+SA
Sbjct: 1   MTSSLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISA 60

Query: 459 FSHCRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQMQNHGVRPNIFTY 280
            S CRQ   AL +F+ +Q+P+VH  N LIRA+  +SQP+Q    FS+MQ  G+  + FTY
Sbjct: 61  LSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTY 120

Query: 279 PFLLKARMGLEFVTAV---HALIEKCGFSDDVLAPNSLIDAYSQCGLMGVSAAKKLFDVM 109
           PFLLKA  GL ++  V   H  IEK G S D+  PN+LID YS+CG +GV  A KLF+ M
Sbjct: 121 PFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM 180

Query: 108 GWRDNVSWNCMISGLVKAGQLKKAR*LFDECP 13
             RD VSWN M+ GLVKAG+L+ AR LFDE P
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARKLFDEMP 212


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  207 bits (526), Expect = 2e-51
 Identities = 114/210 (54%), Positives = 137/210 (65%), Gaps = 4/210 (1%)
 Frame = -3

Query: 630 SAPRRAPRWVSTRRFFEQSLADLHSCTHLTHLCQLLPLILKSDLHRDNVVGTKLVSAFSH 451
           S P R P W STR+  EQ L+DLH CT+L  + QL   ILKS+LH D  V  KL+SAFS 
Sbjct: 31  SVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSL 90

Query: 450 CRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQMQNHGVRPNIFTYPFL 271
           CRQM  A + F+ +Q P+VH YN +IRA+  +SQP Q    F  MQ  G   + FT+PFL
Sbjct: 91  CRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFL 150

Query: 270 LKARMG---LEFVTAVHALIEKCGFSDDVLAPNSLIDAYSQCGLMGVSAAKKLFDVMG-W 103
           LK   G   L  + +VHA IEK GF  DV  PNSLID+YS+CG  G+SAAKKLF  MG  
Sbjct: 151 LKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGAR 210

Query: 102 RDNVSWNCMISGLVKAGQLKKAR*LFDECP 13
           RD VSWN MISGL K G  ++AR +FDE P
Sbjct: 211 RDVVSWNSMISGLAKGGLYEEARKVFDEMP 240


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  207 bits (526), Expect = 2e-51
 Identities = 114/210 (54%), Positives = 137/210 (65%), Gaps = 4/210 (1%)
 Frame = -3

Query: 630 SAPRRAPRWVSTRRFFEQSLADLHSCTHLTHLCQLLPLILKSDLHRDNVVGTKLVSAFSH 451
           S P R P W STR+  EQ L+DLH CT+L  + QL   ILKS+LH D  V  KL+SAFS 
Sbjct: 5   SVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSL 64

Query: 450 CRQMGSALHIFHHIQQPDVHAYNVLIRAYIGDSQPFQGLGAFSQMQNHGVRPNIFTYPFL 271
           CRQM  A + F+ +Q P+VH YN +IRA+  +SQP Q    F  MQ  G   + FT+PFL
Sbjct: 65  CRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFL 124

Query: 270 LKARMG---LEFVTAVHALIEKCGFSDDVLAPNSLIDAYSQCGLMGVSAAKKLFDVMG-W 103
           LK   G   L  + +VHA IEK GF  DV  PNSLID+YS+CG  G+SAAKKLF  MG  
Sbjct: 125 LKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGAR 184

Query: 102 RDNVSWNCMISGLVKAGQLKKAR*LFDECP 13
           RD VSWN MISGL K G  ++AR +FDE P
Sbjct: 185 RDVVSWNSMISGLAKGGLYEEARKVFDEMP 214