BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036480
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    83   3e-14
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    79   3e-13
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              75   6e-12
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               75   6e-12
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              73   3e-11

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
 Frame = -2

Query: 440 KS*FVFDSRW-AKNG*AETMVRGDKQVLWSRIFXXXXXXXXXXXKFIDWRKNNKGNSKAE 264
           K  F FD RW  K+G  E + +G       R                 WRK+     +  
Sbjct: 21  KQNFRFDKRWIGKDGLLEAISQGWNLDSGFREGQFVEKLTNCRRAISKWRKSLIPFGRQT 80

Query: 263 IEIIQKEMEAIQVQGGRRDWDRWKQ----LKCSLNEAYKEEEEYWSRKSRKPWL*EGDKN 96
           IE ++ E++  Q     RD DR ++    L   L EAY++EE+YW +KSR  W+  GD N
Sbjct: 81  IEDLKAELDVAQ-----RDDDRSREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNN 135

Query: 95  SKYFHAVTNERRKNNRIEALKDETGVEYKED 3
           SK+FHA+T +RR  NRI  L DE G+   ED
Sbjct: 136 SKFFHALTKQRRARNRITGLHDENGIWSIED 166


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299 WRKNNKGNSKAEIEIIQKEMEAI--QVQGGRRDWDRWKQLKCSLNEAYKEEEEYWSRKSR 126
           W++ +K +S   I+ +Q +++A   Q+   RR+  R   LK  L++ Y  EE++W  KSR
Sbjct: 285 WKRVSKPSSAVRIQELQFKLDAATKQIPFDRRELAR---LKKELSQEYNNEEQFWQEKSR 341

Query: 125 KPWL*EGDKNSKYFHAVTNERRKNNRIEALKDETGVEYKED 3
             W+  GD+N+KYFHA T  RR  NRI+ L DE G E+  D
Sbjct: 342 IMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSD 382


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = -2

Query: 299 WRKNNKGNSKAEIEIIQKEMEAIQVQGGRRDW---DRWKQLKCSLNEAYKEEEEYWSRKS 129
           W+K N  NS  +I  ++  +E  Q       W    R   LK  L +AY+EEE YW +KS
Sbjct: 248 WKKQNNLNSLDKINQLEAALEKEQ----SLVWPIFQRVSVLKKDLAKAYREEEAYWKQKS 303

Query: 128 RKPWL*EGDKNSKYFHAVTNERRKNNRIEALKDETG 21
           R+ WL  G++NSKYFHA   + R+  RIE LKD  G
Sbjct: 304 RQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNG 339


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = -2

Query: 299 WRKNNKGNSKAEIEIIQKEMEAIQVQGGRRDW---DRWKQLKCSLNEAYKEEEEYWSRKS 129
           W+K N  NS  +I  ++  +E  Q       W    R   LK  L +AY+EEE YW +KS
Sbjct: 251 WKKQNNLNSLDKINQLEAALEKEQ----SLVWPIFQRVSVLKKDLAKAYREEEAYWKQKS 306

Query: 128 RKPWL*EGDKNSKYFHAVTNERRKNNRIEALKDETG 21
           R+ WL  G++NSKYFHA   + R+  RIE LKD  G
Sbjct: 307 RQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNG 342


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -2

Query: 227 VQGGRRDWDRWKQ----LKCSLNEAYKEEEEYWSRKSRKPWL*EGDKNSKYFHAVTNERR 60
           +   +RD  R  +    L   L EAY +EE+YW +KSR  W+  GD NSKYFHA+T +RR
Sbjct: 154 IDAAQRDDSRTSEEITDLTIRLKEAYIDEEQYWYQKSRSLWMKVGDNNSKYFHALTKQRR 213

Query: 59  KNNRIEALKDETGVEYKED 3
             NRI  L DE G  + ED
Sbjct: 214 ARNRIIGLHDENGKWFAED 232