BLASTX nr result

ID: Cephaelis21_contig00036472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036472
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...    95   7e-18
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]    91   1e-16
ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14

>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = -2

Query: 402 WNLHKKPGKCVNRSYCFIIMSLLTLDDVDGAQKMLNEWFSKKVKFHIGIPN--LPAYSEK 229
           WN +K+ G+  N  Y  +I SLL LDD+DGA+++  EW SKKV F I IPN  +  YS K
Sbjct: 305 WNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDIRIPNSMVNVYSRK 364

Query: 228 GHTGKAEAIICCVIKMGEVPNASTWIRVALGYCGKNQMEDAGKTLTRS 85
           GH  KAE  I  ++  GE P+A++W  +A GY    QM  A +T+ ++
Sbjct: 365 GHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRKA 412


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = -2

Query: 402 WNLHKKPGKCVNRSYCFIIMSLLTLDDVDGAQKMLNEWFSKKVKFHIGIPNL--PAYSEK 229
           WNL+K  GK  N  Y  ++ SLL LDD+DGA+K   EW S    F   +PNL   AY +K
Sbjct: 300 WNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKK 359

Query: 228 GHTGKAEAIICCVIKMGEVPNASTWIRVALGYCGKNQMEDAGKTLTRSKYASTR 67
           G   KAE ++   I+ GE P A TW  +A GY   NQME A  TL ++  A+++
Sbjct: 360 GLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQ 413


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = -2

Query: 402 WNLHKKPGKCVNRSYCFIIMSLLTLDDVDGAQKMLNEWFSKKVKFHIGIPNL--PAYSEK 229
           WNL+K  GK  N  Y  ++ SLL LDD+DGA+K   EW S    F   +PNL   AY +K
Sbjct: 300 WNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKK 359

Query: 228 GHTGKAEAIICCVIKMGEVPNASTWIRVALGYCGKNQMEDAGKTLTRSKYASTR 67
           G   KAE ++   I+ GE P A TW  +A GY   NQME A  TL ++  A+++
Sbjct: 360 GLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQ 413


>ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|222872228|gb|EEF09359.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
 Frame = -2

Query: 402 WNLHKKPGKCVNRSYCFIIMSLLTLDDVDGAQKMLNEWFSKKVKFHIGIPN--LPAYSEK 229
           WNL+K  G+ +N SY  +I SLL LDDVDGA+++  EW S    F I IPN  + AYS+K
Sbjct: 299 WNLYKTKGRSLNSSYLCMINSLLKLDDVDGAERIWEEWVSIVKFFDIRIPNVMVSAYSKK 358

Query: 228 GHTGKAEAIICCVIKMGEVPNASTWIRVALGYCGKNQMEDAGKTLTRS 85
           G   KAEA +  ++  G    AST  R+A GY  + QM  A +T+ ++
Sbjct: 359 GLWEKAEAFVGKIVASGIKIEASTLDRLATGYHVRGQMLKASETIKKA 406


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = -2

Query: 402 WNLHKKPGKCVNRSYCFIIMSLLTLDDVDGAQKMLNEWFSKKVKFHIGIPN--LPAYSEK 229
           W L+KK  K  N+ Y  +I SLL  DD+D A+K+L EW S+++ +   +PN  + AY  K
Sbjct: 314 WMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLIDAYCRK 373

Query: 228 GHTGKAEAIICCVIKMGEVPNASTWIRVALGYCGKNQMEDAGKTLTRS 85
           G T KAEA++  ++  G  P   TW  +A GY   +Q+  A + L ++
Sbjct: 374 GLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKA 421


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