BLASTX nr result

ID: Cephaelis21_contig00036340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036340
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    78   8e-13
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   1e-10
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    70   2e-10
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   5e-10
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    68   7e-10

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/89 (38%), Positives = 56/89 (62%)
 Frame = -1

Query: 379 VAWRDLTLPKEEGGLGLRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLRTCSIWEL 200
           VAW  +  PK +GGL + +F++WN A L K+LW+++ K+DSLW++WVH  Y R   I  +
Sbjct: 139 VAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNLYKKEDSLWIQWVHTYYTRGEDIMTV 198

Query: 199 PLRPGLSRLMRRLLEIRDEIVRRQGSVDL 113
           P++   S +M+ +L+ R ++       DL
Sbjct: 199 PIKASCSWIMKGILKQRVKVQEMAQWTDL 227


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/126 (26%), Positives = 63/126 (50%)
 Frame = -1

Query: 379  VAWRDLTLPKEEGGLGLRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLRTCSIWEL 200
            VAW  +  PK  GG  + + + WN A + K+LW I  K+D LWVRW+H  Y++   I  +
Sbjct: 845  VAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTV 904

Query: 199  PLRPGLSRLMRRLLEIRDEIVRRQGSVDLAVVCAQSWQIDRAARAYDYFRHRARRVPWAQ 20
             +    + ++R++++ RD +       ++ +    S +     +AY        RV W +
Sbjct: 905  NISNQTTWILRKIVKARDHLSNIGDWDEICIGDKFSMK-----KAYKKISENGERVRWRR 959

Query: 19   VVWRSY 2
            ++  +Y
Sbjct: 960  LICNNY 965


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -1

Query: 379 VAWRDLTLPKEEGGLGLRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLRTCSIWEL 200
           +AW D+  PK+EGGLGLR  +  N     K++W I    DSLWV+W+H T L+  S W +
Sbjct: 242 IAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAV 301

Query: 199 PLRPGL-SRLMRRLLEIRDEIVR 134
                L S + +++L+ RD  ++
Sbjct: 302 RENTSLGSWMWKKVLKFRDAAIQ 324


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/85 (37%), Positives = 49/85 (57%)
 Frame = -1

Query: 379  VAWRDLTLPKEEGGLGLRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLRTCSIWEL 200
            VAW  L  PK  GGL + +   WN A + K+LW I  K+D LWVRWV+  Y++  +I  +
Sbjct: 848  VAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENV 907

Query: 199  PLRPGLSRLMRRLLEIRDEIVRRQG 125
             +    S ++R++ E R+ + R  G
Sbjct: 908  TVSSNTSWILRKIFESRELLTRTGG 932


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = -1

Query: 379 VAWRDLTLPKEEGGLGLRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLRTCSIWEL 200
           VAW ++ LP +EGGL + D  +WN A   K+LW + +K  SLWV WV    L+  S+WE+
Sbjct: 312 VAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEI 371

Query: 199 PLRPGLSRLMRRLLEIRD 146
               G S   R +L  RD
Sbjct: 372 DAGAGRSWCFRAILRKRD 389


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