BLASTX nr result

ID: Cephaelis21_contig00036338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036338
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CBI31095.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_003610950.1| Pentatricopeptide repeat-containing protein ...   145   3e-33
ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containi...   123   1e-26

>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/95 (73%), Positives = 81/95 (85%)
 Frame = -1

Query: 452 RAGRFHELELLIDKMPYKDDKIVWEVLLSSCRVHINLSLARRAAEELFRLDPKNSSPYVL 273
           RAGR HE E+LIDKMP K D I+WEVLLSSCRV+ ++SLARRAAEELF LDP+NS+PYVL
Sbjct: 669 RAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVL 728

Query: 272 LANMYSSLGRWDEANNVRSMMIEKEVTKDPGYSWI 168
           LAN+YSSLGRWD+A  VR +M   +V KDPGYSWI
Sbjct: 729 LANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWI 763


>emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/95 (73%), Positives = 81/95 (85%)
 Frame = -1

Query: 452 RAGRFHELELLIDKMPYKDDKIVWEVLLSSCRVHINLSLARRAAEELFRLDPKNSSPYVL 273
           RAGR HE E+LIDKMP K D I+WEVLLSSCRV+ ++SLARRAAEELF LDP+NS+PYVL
Sbjct: 640 RAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVL 699

Query: 272 LANMYSSLGRWDEANNVRSMMIEKEVTKDPGYSWI 168
           LAN+YSSLGRWD+A  VR +M   +V KDPGYSWI
Sbjct: 700 LANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWI 734


>ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512285|gb|AES93908.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/111 (61%), Positives = 90/111 (81%)
 Frame = -1

Query: 452 RAGRFHELELLIDKMPYKDDKIVWEVLLSSCRVHINLSLARRAAEELFRLDPKNSSPYVL 273
           R GRF+E+E+++D MPYKDD IVWEV+LSSCRVH N+SLA+RAAEEL RL+P+NS+PYVL
Sbjct: 668 RVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVL 727

Query: 272 LANMYSSLGRWDEANNVRSMMIEKEVTKDPGYSWIGQEKWEEEPQFQMFGN 120
           LANMYSS+GRWD+A  VR +M + ++ KDPGYS   + K++ + +   F N
Sbjct: 728 LANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYS-RSEFKYDVQNKTSFFAN 777


>ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/93 (69%), Positives = 82/93 (88%)
 Frame = -1

Query: 452 RAGRFHELELLIDKMPYKDDKIVWEVLLSSCRVHINLSLARRAAEELFRLDPKNSSPYVL 273
           RAGRF+E+E+++D MP KDD +VWEV+LSSCR+H NLSLA+RAAEEL+RLDP+NS+ YVL
Sbjct: 666 RAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVL 725

Query: 272 LANMYSSLGRWDEANNVRSMMIEKEVTKDPGYS 174
           LANMYSSLG+WD+A+ VR +M   +V KDPGYS
Sbjct: 726 LANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYS 758


>dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|218190136|gb|EEC72563.1|
           hypothetical protein OsI_05996 [Oryza sativa Indica
           Group]
          Length = 803

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/98 (61%), Positives = 75/98 (76%)
 Frame = -1

Query: 452 RAGRFHELELLIDKMPYKDDKIVWEVLLSSCRVHINLSLARRAAEELFRLDPKNSSPYVL 273
           RAGRF E+E LI KMP KDD I+WEVLL++C VH N  L + AAE LFR+DPKN SPYVL
Sbjct: 667 RAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVL 726

Query: 272 LANMYSSLGRWDEANNVRSMMIEKEVTKDPGYSWIGQE 159
           L+N+Y+SLGR  +A+ VR++M  + V K  GYSWI Q+
Sbjct: 727 LSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQK 764


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