BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036325
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]   102   2e-28
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    95   1e-24
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    95   1e-24
gb|AAD17351.1| contains similarity to retrovirus-related polypro...    99   1e-24
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              92   4e-24

>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score =  102 bits (255), Expect(2) = 2e-28
 Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = -1

Query: 409 IEGLCGLDLDDYLNGKLSLVTMRFLSVLEQGDEV--QKTNIFHTRCKVNDKLCMLIIDGG 236
           +E  C  +++  + G+ SLV    LS   + D++  Q+ NIFHTRC +N+K+C +IIDGG
Sbjct: 376 LEDACDDNVEYPVEGE-SLVARCALSAQAKKDDLEQQRENIFHTRCHINNKVCSMIIDGG 434

Query: 235 SCPNLAGTYFIDXXXXXXXKHP*PYRLKWMNDCGEIKVNRKVLVNFKIGRYE 80
           SC N+A T  ++       KHP PY+L+W+ND GE KVN++VLV+F IGRY+
Sbjct: 435 SCTNVASTTLVENLNLPTLKHPRPYKLQWLNDFGEDKVNKEVLVSFSIGRYK 486



 Score = 48.1 bits (113), Expect(2) = 2e-28
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 69  CDIVPMQVGHILLGRPWEFDRSV 1
           CDIVPM  GHILLGRPW+FDR V
Sbjct: 491 CDIVPMHAGHILLGRPWQFDRKV 513


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 95.1 bits (235), Expect(2) = 1e-24
 Identities = 47/123 (38%), Positives = 71/123 (57%)
 Frame = -1

Query: 448 KSSNGSGCEKYSDIEGLCGLDLDDYLNGKLSLVTMRFLSVLEQGDEVQKTNIFHTRCKVN 269
           +   G G  +  D+E    L  D  +     ++T+   SV    DE Q+ N+FHTRC + 
Sbjct: 379 EEEEGEGVSEEDDLE----LPNDGIIGVVRRIMTINLGSV----DEGQRENLFHTRCGIK 430

Query: 268 DKLCMLIIDGGSCPNLAGTYFIDXXXXXXXKHP*PYRLKWMNDCGEIKVNRKVLVNFKIG 89
            K   +IIDGGSC N+  +Y +D       K   PYRL+W+NDCGE++VN++ +++F +G
Sbjct: 431 GKTYSMIIDGGSCANVVSSYLVDKLGIACMKRSTPYRLQWLNDCGEVQVNKQCMISFNVG 490

Query: 88  RYE 80
           RYE
Sbjct: 491 RYE 493



 Score = 43.1 bits (100), Expect(2) = 1e-24
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 69  CDIVPMQVGHILLGRPWEFDR 7
           CD+VPMQ  H+LLGRPW++DR
Sbjct: 498 CDVVPMQACHVLLGRPWQYDR 518


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 95.1 bits (235), Expect(2) = 1e-24
 Identities = 47/123 (38%), Positives = 71/123 (57%)
 Frame = -1

Query: 448 KSSNGSGCEKYSDIEGLCGLDLDDYLNGKLSLVTMRFLSVLEQGDEVQKTNIFHTRCKVN 269
           +   G G  +  D+E    L  D  +     ++T+   SV    DE Q+ N+FHTRC + 
Sbjct: 379 EEEEGEGVSEEDDLE----LPNDGIIGVVRRIMTINLGSV----DEGQRENLFHTRCGIK 430

Query: 268 DKLCMLIIDGGSCPNLAGTYFIDXXXXXXXKHP*PYRLKWMNDCGEIKVNRKVLVNFKIG 89
            K   +IIDGGSC N+  +Y +D       K   PYRL+W+NDCGE++VN++ +++F +G
Sbjct: 431 GKTYSMIIDGGSCANVVSSYLVDKLGIACMKRSTPYRLQWLNDCGEVQVNKQCMISFNVG 490

Query: 88  RYE 80
           RYE
Sbjct: 491 RYE 493



 Score = 43.1 bits (100), Expect(2) = 1e-24
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 69  CDIVPMQVGHILLGRPWEFDR 7
           CD+VPMQ  H+LLGRPW++DR
Sbjct: 498 CDVVPMQACHVLLGRPWQYDR 518


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score = 99.0 bits (245), Expect(2) = 1e-24
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = -1

Query: 388 DLDDYLNGKLSLVTMRFLSVLEQGDE-VQKTNIFHTRCKVNDKLCMLIIDGGSCPNLAGT 212
           D+++   G+L LVTMR LSVL + +E  Q+ N+FHTRC +  K+C LIIDGGSC N+A  
Sbjct: 318 DVEEAPKGEL-LVTMRVLSVLNKAEEQAQRENLFHTRCLIKGKVCSLIIDGGSCTNVASE 376

Query: 211 YFIDXXXXXXXKHP*PYRLKWMNDCGEIKVNRKVLVNFKIGRYE 80
             +         HP PY+L+W+N+ GE+ V R+V V   IG+YE
Sbjct: 377 TMVQKLGLEEFPHPKPYKLQWLNESGEMAVTRQVQVPLAIGKYE 420



 Score = 39.3 bits (90), Expect(2) = 1e-24
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -2

Query: 69  CDIVPMQVGHILLGRPWEFDR 7
           CDI+P++  H+LLGRPW+ DR
Sbjct: 425 CDILPLEASHVLLGRPWQSDR 445


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 92.4 bits (228), Expect(2) = 4e-24
 Identities = 43/97 (44%), Positives = 62/97 (63%)
 Frame = -1

Query: 370 NGKLSLVTMRFLSVLEQGDEVQKTNIFHTRCKVNDKLCMLIIDGGSCPNLAGTYFIDXXX 191
           +G L +V     S +++ D  Q+ N+FHTRC V  K+C LIIDGGSC N+A T  +    
Sbjct: 340 SGDLLMVRRMLGSQIKEEDTGQRENLFHTRCFVQGKVCSLIIDGGSCTNVASTRLVSKLK 399

Query: 190 XXXXKHP*PYRLKWMNDCGEIKVNRKVLVNFKIGRYE 80
                HP PY+L+W+N+  E+ VN++V + FKIG+YE
Sbjct: 400 LETKPHPKPYKLQWLNESVEMLVNKQVEICFKIGKYE 436



 Score = 43.9 bits (102), Expect(2) = 4e-24
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 69  CDIVPMQVGHILLGRPWEFDR 7
           CD+VPM+  H+LLGRPW+FDR
Sbjct: 441 CDVVPMEASHLLLGRPWQFDR 461