BLASTX nr result

ID: Cephaelis21_contig00036286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036286
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531104.1| DNA repair and recombination protein radB, p...   124   1e-26
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...   114   9e-24
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              114   9e-24
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...   112   4e-23
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin...   108   4e-22

>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/84 (70%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   GHALMVSAGFQLKRLAHEHNLAVLMTNHMVAGEGGVTKPALGESWKGIPHVRLLLSRERT 180
           GHALM SAG  LK+LAHEHN+AVL+TNHMVAGEGG  KPALGESWK IPHVRLLLSR++ 
Sbjct: 230 GHALMTSAGILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRDQG 289

Query: 181 SNISSMSILRHPSQAVGGRVEFMV 252
            N+ +++IL+HPSQA G    F V
Sbjct: 290 KNVCNVTILKHPSQASGKAARFTV 313


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score =  114 bits (285), Expect = 9e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = +1

Query: 1   GHALMVSAGFQLKRLAHEHNLAVLMTNHMVAGEGGVTKPALGESWKGIPHVRLLLSRERT 180
           G ALM+SAGF LK+LAHEHNLAV++TNHMV GEGG+ KPALGESWK IPHVRLLLSR+  
Sbjct: 229 GRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPG 288

Query: 181 SNISSMSILRH 213
           S+I  MSIL+H
Sbjct: 289 SSICHMSILKH 299


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  114 bits (285), Expect = 9e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = +1

Query: 1   GHALMVSAGFQLKRLAHEHNLAVLMTNHMVAGEGGVTKPALGESWKGIPHVRLLLSRERT 180
           G ALM+SAGF LK+LAHEHNLAV++TNHMV GEGG+ KPALGESWK IPHVRLLLSR+  
Sbjct: 288 GRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPG 347

Query: 181 SNISSMSILRH 213
           S+I  MSIL+H
Sbjct: 348 SSICHMSILKH 358


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   GHALMVSAGFQLKRLAHEHNLAVLMTNHMVAGEGGVTKPALGESWKGIPHVRLLLSRERT 180
           GHALM+SAG  LK++AHEHN+AVL+TNH V G+ G +KPALGESWK +PHVRL LSR+  
Sbjct: 229 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 288

Query: 181 SNISSMSILRHPSQAVGGRVEFMVF 255
           SN+   SIL+H S A G    F+++
Sbjct: 289 SNVCQASILKHSSMASGMTARFVIY 313


>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
           gi|255635337|gb|ACU18022.1| unknown [Glycine max]
          Length = 325

 Score =  108 bits (271), Expect = 4e-22
 Identities = 48/73 (65%), Positives = 64/73 (87%)
 Frame = +1

Query: 1   GHALMVSAGFQLKRLAHEHNLAVLMTNHMVAGEGGVTKPALGESWKGIPHVRLLLSRERT 180
           GHALM+SAGF LK+LAHEHN+AVL+TNH+V G+ G++K A+GESWK +PHVR+LLSR+  
Sbjct: 236 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGDDGISKTAMGESWKSVPHVRILLSRDCG 295

Query: 181 SNISSMSILRHPS 219
           SN+ ++SIL+ PS
Sbjct: 296 SNVCNISILKPPS 308


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