BLASTX nr result

ID: Cephaelis21_contig00036215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036215
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875792.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002875792.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321630|gb|EFH52051.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 764

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   KRLKVPLKSLNRKHFSHISSRASTTRKELESIQLRAYNSPEDTDLQEQLGEHR-RIAWR- 174
           ++LK+ L+ LN++H+S IS R      ++ +IQ     +P   D Q    EH+ R  W+ 
Sbjct: 435 RKLKLLLRKLNKRHYSGISERVKAQAAKIANIQRLLLTNP---DAQAAREEHQERAIWQT 491

Query: 175 LSAAERKFYFQKAKCRYIVASDRNTKLFHSVVKRNARRNHI 297
           L +AE+KF+ QK++  ++   DRNT  FH  V   A RNHI
Sbjct: 492 LISAEKKFFRQKSRVIWLHLGDRNTTFFHKSVIGRAARNHI 532


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = +1

Query: 1   KRLKVPLKSLNRKHFSHISSRASTTRKELESIQLRAYNSPEDTDL--QEQLGEHRRIAWR 174
           K+LK  LK  N  HFS+IS R    + E++  Q   + + E+  L  +E+   H+  +  
Sbjct: 253 KKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYAS-- 310

Query: 175 LSAAERKFYFQKAKCRYIVASDRNTKLFHSVVKRNARRNHITSVT 309
              AE  F+ QKA+ +++   D+NT  FH  V     RN + S+T
Sbjct: 311 TVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLT 355


Top