BLASTX nr result

ID: Cephaelis21_contig00036153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036153
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   134   1e-29
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   129   3e-28
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   129   3e-28
ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27

>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = +1

Query: 4   FEEMVPRRLRPDAVTFVAILSACRHRGLVGVGERYFCSMTEDYSLIPERDHYACMIDLYG 183
           FEEM+ R +RPDAVTFVA+LSACRH GLV +GE+YF SMT DY+++PE DHYACMIDLYG
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYACMIDLYG 537

Query: 184 RANQLEKAVEFMENIPMELDGVILGTFI 267
           RANQLEKAV FM+ IP+E D VILG F+
Sbjct: 538 RANQLEKAVAFMKRIPIEPDAVILGAFL 565


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/89 (66%), Positives = 73/89 (82%)
 Frame = +1

Query: 1    LFEEMVPRRLRPDAVTFVAILSACRHRGLVGVGERYFCSMTEDYSLIPERDHYACMIDLY 180
            LF+EMV    +PDA+TFVA+LSACRH GLV +GE +F SM+ DY++ PE DHYACMIDLY
Sbjct: 900  LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959

Query: 181  GRANQLEKAVEFMENIPMELDGVILGTFI 267
            GRANQL+KA+EFM  IP++LD VI G F+
Sbjct: 960  GRANQLDKALEFMRKIPIQLDAVIWGAFL 988


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/89 (66%), Positives = 73/89 (82%)
 Frame = +1

Query: 1    LFEEMVPRRLRPDAVTFVAILSACRHRGLVGVGERYFCSMTEDYSLIPERDHYACMIDLY 180
            LF+EMV    +PDA+TFVA+LSACRH GLV +GE +F SM+ DY++ PE DHYACMIDLY
Sbjct: 900  LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959

Query: 181  GRANQLEKAVEFMENIPMELDGVILGTFI 267
            GRANQL+KA+EFM  IP++LD VI G F+
Sbjct: 960  GRANQLDKALEFMRKIPIQLDAVIWGAFL 988


>ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/89 (68%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   LFEEMVPRRLRPDAVTFVAILSACRHRGLVGVGERYFCSMTEDYSLIPERDHYACMIDLY 180
           LF+EM+ R + PDAVTFVA+LSACRHRGLV +GE+ F SMTEDY ++PE DHYACMIDLY
Sbjct: 480 LFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLY 539

Query: 181 GRANQLEKAVEFMENIPME-LDGVILGTF 264
           GRA+QLEK V FM+ IPME  D  ++G F
Sbjct: 540 GRASQLEKMVLFMQRIPMEHQDAAVVGAF 568


>ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|222849467|gb|EEE87014.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   LFEEMVPRRLRPDAVTFVAILSACRHRGLVGVGERYFCSMTEDYSLIPERDHYACMIDLY 180
           LF+EM+ R + PDA+TFVA+LSACRHRGLV +GER F SMTEDY ++PE DHYACMIDLY
Sbjct: 480 LFQEMLERGVGPDAITFVALLSACRHRGLVDLGERTFYSMTEDYLILPETDHYACMIDLY 539

Query: 181 GRANQLEKAVEFMENIPMEL-DGVILGTF 264
           GRA+QLEK V FM+ IP+E  D  + G F
Sbjct: 540 GRASQLEKMVLFMQRIPIEYQDAAVAGAF 568


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