BLASTX nr result

ID: Cephaelis21_contig00036152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036152
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   134   1e-29
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   130   9e-29
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   130   9e-29
ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat...   122   2e-26

>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = +1

Query: 4   FEEMVPKRLRPDAVTFVAILSACRHSGLVGVGERYFCSMTEDYSLTPEKDHYACMIDLYG 183
           FEEM+ + +RPDAVTFVA+LSACRH GLV +GE+YF SMT DY++ PE DHYACMIDLYG
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYACMIDLYG 537

Query: 184 RANQLEKAVEFMENIPMELDAVILGTFI 267
           RANQLEKAV FM+ IP+E DAVILG F+
Sbjct: 538 RANQLEKAVAFMKRIPIEPDAVILGAFL 565


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/89 (67%), Positives = 74/89 (83%)
 Frame = +1

Query: 1    LFEEMVPKRLRPDAVTFVAILSACRHSGLVGVGERYFCSMTEDYSLTPEKDHYACMIDLY 180
            LF+EMV    +PDA+TFVA+LSACRH GLV +GE +F SM+ DY++ PE DHYACMIDLY
Sbjct: 900  LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959

Query: 181  GRANQLEKAVEFMENIPMELDAVILGTFI 267
            GRANQL+KA+EFM  IP++LDAVI G F+
Sbjct: 960  GRANQLDKALEFMRKIPIQLDAVIWGAFL 988


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/89 (67%), Positives = 74/89 (83%)
 Frame = +1

Query: 1    LFEEMVPKRLRPDAVTFVAILSACRHSGLVGVGERYFCSMTEDYSLTPEKDHYACMIDLY 180
            LF+EMV    +PDA+TFVA+LSACRH GLV +GE +F SM+ DY++ PE DHYACMIDLY
Sbjct: 900  LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959

Query: 181  GRANQLEKAVEFMENIPMELDAVILGTFI 267
            GRANQL+KA+EFM  IP++LDAVI G F+
Sbjct: 960  GRANQLDKALEFMRKIPIQLDAVIWGAFL 988


>ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   LFEEMVPKRLRPDAVTFVAILSACRHSGLVGVGERYFCSMTEDYSLTPEKDHYACMIDLY 180
           LF+EM+ + + PDAVTFVA+LSACRH GLV +GE+ F SMTEDY + PE DHYACMIDLY
Sbjct: 480 LFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLY 539

Query: 181 GRANQLEKAVEFMENIPME-LDAVILGTF 264
           GRA+QLEK V FM+ IPME  DA ++G F
Sbjct: 540 GRASQLEKMVLFMQRIPMEHQDAAVVGAF 568


>ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 681

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/89 (65%), Positives = 74/89 (83%)
 Frame = +1

Query: 1   LFEEMVPKRLRPDAVTFVAILSACRHSGLVGVGERYFCSMTEDYSLTPEKDHYACMIDLY 180
           LF+EM+ K ++PDAVTFVA+LSACRH GLV +GE++F SM E Y++ PE  HYACM+D+Y
Sbjct: 475 LFQEMLNKSVKPDAVTFVALLSACRHRGLVELGEQFFMSM-EHYNVLPEIYHYACMVDMY 533

Query: 181 GRANQLEKAVEFMENIPMELDAVILGTFI 267
           GRANQLEKAVEFM  IP+++DA I G F+
Sbjct: 534 GRANQLEKAVEFMRKIPIKIDATIWGAFL 562


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