BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036115
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    70   1e-10
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    69   3e-10
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    62   5e-08
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...    60   1e-07
gb|ABA97687.1| retrotransposon protein, putative, unclassified [...    59   5e-07

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 49/79 (62%)
 Frame = +3

Query: 36  ADDVIIFSS*NRKYLGKIMKILNKYEQVSGQKINSAKSCFMVGKKKLDSLRSRVAQITAF 215
           +DD I+F + +++ L   ++ L+ YE  SGQ IN  KSCF V      +  +++  IT  
Sbjct: 603 SDDTILFCNGSKETLEMFLRTLHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCM 662

Query: 216 SYQELPVKYLGCPLYVGRK 272
           ++QE P+KYLGCPL  G+K
Sbjct: 663 NHQEFPIKYLGCPLISGKK 681


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/87 (40%), Positives = 55/87 (63%)
 Frame = +3

Query: 9   SFPITHLTYADDVIIFSS*NRKYLGKIMKILNKYEQVSGQKINSAKSCFMVGKKKLDSLR 188
           SFP TH+ YADDV+IF +  ++ + +++KI ++Y +VSGQ IN+AKS F        S  
Sbjct: 686 SFP-THILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFT-SAMTGSRV 743

Query: 189 SRVAQITAFSYQELPVKYLGCPLYVGR 269
             ++ +  F+   LP  YLGCP++ G+
Sbjct: 744 QMISSLLGFNVGSLPFTYLGCPIFRGK 770


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/83 (38%), Positives = 47/83 (56%)
 Frame = +3

Query: 21  THLTYADDVIIFSS*NRKYLGKIMKILNKYEQVSGQKINSAKSCFMVGKKKLDSLRSRVA 200
           TH+ YADDV+IF +  ++ +  ++K  N Y +VS Q IN+ KS F  G     S    +A
Sbjct: 152 THILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQFYAG-AMTTSHSQMIA 210

Query: 201 QITAFSYQELPVKYLGCPLYVGR 269
               FS   +P  YLGCP++ G+
Sbjct: 211 GTLGFSADNIPFFYLGCPIFKGK 233


>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 44/85 (51%)
 Frame = +3

Query: 18  ITHLTYADDVIIFSS*NRKYLGKIMKILNKYEQVSGQKINSAKSCFMVGKKKLDSLRSRV 197
           + HL +ADD + F   + K   K+  IL+KYE  SGQKIN AK       K   ++R RV
Sbjct: 611 VNHLLFADDTMFFCRVDPKSCLKLKSILHKYELASGQKINQAKYSITFSAKTPPAVRERV 670

Query: 198 AQITAFSYQELPVKYLGCPLYVGRK 272
            QI     +    KYLG P   GRK
Sbjct: 671 KQILLIQKEGGQGKYLGLPELFGRK 695


>gb|ABA97687.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1070

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 18  ITHLTYADDVIIFSS*NRKYLGKIMKILNKYEQVSGQKINSAKS-CFMVGKKKLDSLRSR 194
           +THL YADD I+F + +   +  +  +L  +E++SG KIN  KS   +VG  K +S   R
Sbjct: 706 LTHLQYADDTILFMTNSDNNIAVVKFLLFCFEEMSGLKINYPKSEVIVVGANKEES--KR 763

Query: 195 VAQITAFSYQELPVKYLGCPLYVGR 269
           VA +     +ELP+ YLG P++ GR
Sbjct: 764 VANLLNCKIRELPITYLGIPVHEGR 788