BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036069
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    95   5e-18
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    87   1e-15
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...    84   2e-14
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    84   2e-14
gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo...    82   4e-14

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/130 (37%), Positives = 74/130 (56%)
 Frame = +3

Query: 3    LINGSPTRFFQASRGLKQGDPLSPSLFILVVEALSRGLNLLLAEGVMVPYSLPKNAPLLS 182
            L+NG    FF  S G++QGDPLSP LF LV E LSR L++   +G ++P S  +     +
Sbjct: 630  LVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPT 689

Query: 183  HLSFVNDLIIFVRGYCRSLRSIFKFLEEYELATGQRVNKAKSFFLVSKFSSPAFVRWLEG 362
            H+ + +D++IF  G  R++R + K   +Y   +GQ +N AKS F  S  +  + V+ +  
Sbjct: 690  HILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFTSAMTG-SRVQMISS 748

Query: 363  LSGMTRTSLP 392
            L G    SLP
Sbjct: 749  LLGFNVGSLP 758


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/127 (37%), Positives = 72/127 (56%)
 Frame = +3

Query: 3   LINGSPTRFFQASRGLKQGDPLSPSLFILVVEALSRGLNLLLAEGVMVPYSLPKNAPLLS 182
           L NG  T  F  SRGL+QGDPLSP LF+L +E L   ++L +      P S+ +  PLLS
Sbjct: 73  LWNGEKTESFIPSRGLRQGDPLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLLS 132

Query: 183 HLSFVNDLIIFVRGYCRSLRSIFKFLEEYELATGQRVNKAKSFFLVSKFSSPAFVRWLEG 362
           H+ F +DLI+F       +R + K LE++ +A+GQ+V+  KS    S+       +++  
Sbjct: 133 HICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISD 192

Query: 363 LSGMTRT 383
            SG+  T
Sbjct: 193 ESGIKST 199


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31433076|gb|AAP54636.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/111 (37%), Positives = 66/111 (59%)
 Frame = +3

Query: 9   NGSPTRFFQASRGLKQGDPLSPSLFILVVEALSRGLNLLLAEGVMVPYSLPKNAPLLSHL 188
           NG+  + F  +RGL+QGDPLSP LF+ V + LS  L   +A+  + P+ + + AP +SHL
Sbjct: 30  NGTLLQSFAPTRGLRQGDPLSPFLFLFVADGLSLLLKEKVAQNSLTPFKVCRAAPGISHL 89

Query: 189 SFVNDLIIFVRGYCRSLRSIFKFLEEYELATGQRVNKAKSFFLVSKFSSPA 341
            F +D ++F + + R    + + L  Y + TGQ +N AK   L+   S+PA
Sbjct: 90  LFADDTLLFFKAHQREAEVVKEVLSSYAMGTGQLINPAKCSILMGGASTPA 140


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/130 (35%), Positives = 70/130 (53%)
 Frame = +3

Query: 3    LINGSPTRFFQASRGLKQGDPLSPSLFILVVEALSRGLNLLLAEGVMVPYSLPKNAPLLS 182
            LING P   F  SRGL+QGDPLSP LF+ V + LSR +N +  + ++ P ++  N   +S
Sbjct: 1227 LINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVS 1286

Query: 183  HLSFVNDLIIFVRGYCRSLRSIFKFLEEYELATGQRVNKAKSFFLVSKFSSPAFVRWLEG 362
            HL F +D + F+R   ++  ++   L  Y +A+GQ +N  KS    S  + P     L  
Sbjct: 1287 HLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSS 1346

Query: 363  LSGMTRTSLP 392
            +  +   S P
Sbjct: 1347 IMQIPVVSDP 1356


>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
          Length = 813

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 47/111 (42%), Positives = 62/111 (55%)
 Frame = +3

Query: 9    NGSPTRFFQASRGLKQGDPLSPSLFILVVEALSRGLNLLLAEGVMVPYSLPKNAPLLSHL 188
            NG+    F  SRGL+QGDPLSP LF+ V +  SR +   +A G + P  + + AP +SHL
Sbjct: 694  NGTLLDTFAPSRGLRQGDPLSPFLFLFVADGFSRLMEERVAAGDITPVKICRGAPGISHL 753

Query: 189  SFVNDLIIFVRGYCRSLRSIFKFLEEYELATGQRVNKAKSFFLVSKFSSPA 341
             F +D ++F +  C   R I   L EY L TGQ VN  K   L    +SPA
Sbjct: 754  LFADDTLLFFKADCEQARLIKGVLNEYALGTGQLVNPNKCSILFDD-TSPA 803