BLASTX nr result

ID: Cephaelis21_contig00036018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036018
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier com...    91   1e-16
ref|XP_002512623.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|NP_001234192.1| auxin efflux facilitator SlPIN5 [Solanum lyc...    73   2e-11
ref|XP_002325466.1| auxin efflux carrier component [Populus tric...    73   2e-11
ref|XP_002272306.1| PREDICTED: putative auxin efflux carrier com...    72   4e-11

>ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier component 8 [Vitis
           vinifera] gi|297735290|emb|CBI17652.3| unnamed protein
           product [Vitis vinifera]
          Length = 356

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/118 (41%), Positives = 72/118 (61%)
 Frame = +1

Query: 1   LIVGVPLLRAMYGELGENLVIQSSVIQNXXXXXXXXXXXEFRREYSAVSYNNTVNGDLQL 180
           L+VGVPL++AMYG LG +LV+QSSV+Q            EFRR  + +S +NT  GD  +
Sbjct: 114 LVVGVPLIKAMYGPLGVDLVVQSSVVQAIIWLTLLLFVLEFRRTGTGIS-SNTTMGDSGV 172

Query: 181 MSNESGSYLNENTAPAPAPALMCKKSSPWSILNVVCLKLAKNPNFYSCMVGVIWALLA 354
           +  E G  L  N        ++  + S WS++  V LKLA+NPN Y+C++G++WA +A
Sbjct: 173 IEVEPGKDLETN------EMVVSTRLSFWSLMRKVWLKLAQNPNSYACIIGIVWAFIA 224


>ref|XP_002512623.1| conserved hypothetical protein [Ricinus communis]
           gi|223548584|gb|EEF50075.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 357

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/118 (37%), Positives = 64/118 (54%)
 Frame = +1

Query: 1   LIVGVPLLRAMYGELGENLVIQSSVIQNXXXXXXXXXXXEFRREYSAVSYNNTVNGDLQL 180
           L+VGVPL++AMYG +  +LV+QSSV+Q            EFRR    +S +N       L
Sbjct: 114 LVVGVPLMKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRLDISSSNYNKNSDNL 173

Query: 181 MSNESGSYLNENTAPAPAPALMCKKSSPWSILNVVCLKLAKNPNFYSCMVGVIWALLA 354
             +  GS        A   A+     S W ++ VV +KLA NPN Y+C++G++WA +A
Sbjct: 174 EKDLEGS------GSAGNMAISSSGPSFWVLMKVVGVKLAMNPNSYACILGLVWAFIA 225


>ref|NP_001234192.1| auxin efflux facilitator SlPIN5 [Solanum lycopersicum]
           gi|312983232|gb|ADR30412.1| auxin efflux facilitator
           SlPIN5 [Solanum lycopersicum]
          Length = 358

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/118 (36%), Positives = 68/118 (57%)
 Frame = +1

Query: 1   LIVGVPLLRAMYGELGENLVIQSSVIQNXXXXXXXXXXXEFRREYSAVSYNNTVNGDLQL 180
           L+VGVPL++AMYG+LG +LV+Q++VIQ            EF +  + ++ N+ +  D   
Sbjct: 114 LVVGVPLMKAMYGDLGVDLVVQAAVIQALLWLTSLLFALEFWK--TKMTNNSNLIDDNNN 171

Query: 181 MSNESGSYLNENTAPAPAPALMCKKSSPWSILNVVCLKLAKNPNFYSCMVGVIWALLA 354
            S E G+  + NT       +   + + W ++  V  KLAKNPN Y+C +G+ WAL+A
Sbjct: 172 NSLELGNISSTNTQMRNINNI---ELAFWPLMKAVSTKLAKNPNSYACFLGLFWALVA 226


>ref|XP_002325466.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222862341|gb|EEE99847.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 346

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/118 (35%), Positives = 63/118 (53%)
 Frame = +1

Query: 1   LIVGVPLLRAMYGELGENLVIQSSVIQNXXXXXXXXXXXEFRREYSAVSYNNTVNGDLQL 180
           L++GVPL++AMYG    +LV+QSSVIQ+           EFRR    VS +N    D  L
Sbjct: 114 LVLGVPLIKAMYGPTAVDLVVQSSVIQSIIWLTMLLLVLEFRRSGLGVSSSNP---DKDL 170

Query: 181 MSNESGSYLNENTAPAPAPALMCKKSSPWSILNVVCLKLAKNPNFYSCMVGVIWALLA 354
             N              A + +  + + W ++  V +KLA NPN Y+C++G++WA +A
Sbjct: 171 EGN--------------ADSTVSSRPAFWCLMKTVGVKLAMNPNSYACIIGLVWAFIA 214


>ref|XP_002272306.1| PREDICTED: putative auxin efflux carrier component 8 [Vitis
           vinifera] gi|297735277|emb|CBI17639.3| unnamed protein
           product [Vitis vinifera]
          Length = 361

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
 Frame = +1

Query: 1   LIVGVPLLRAMYGELGENLVIQSSVIQNXXXXXXXXXXXEFRREYSAVSYNNTVNGDLQL 180
           L +GVP+L AMYG  G NLV+Q+SV+Q            EF + +  VS N T+  D  +
Sbjct: 115 LFIGVPILEAMYGRTGVNLVLQASVVQVIIYSTVFLILLEFWKSF--VSLNKTIPEDSNI 172

Query: 181 ---------MSNESGSYLNENTAPAPAPALMCKKSSPWSILNVVCLKLAKNPNFYSCMVG 333
                    +     + ++E++ P          SS W ++    LKL KNPN Y+C++G
Sbjct: 173 APVGAAEEDLEGHRTTEVSESSGP----------SSFWPLMRNALLKLVKNPNIYACVLG 222

Query: 334 VIWALLA 354
           +IWA L+
Sbjct: 223 LIWAFLS 229


Top