BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036005
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   326   3e-87
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   303   4e-80
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   299   6e-79
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   296   5e-78
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   295   6e-78

>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  326 bits (836), Expect = 3e-87
 Identities = 156/271 (57%), Positives = 199/271 (73%)
 Frame = -2

Query: 814  FQKSKMLKDAVELYEHMMDSPFKPLATECSLLLRVIAGCKNPDLDLVFRVVRRYEAAGFC 635
            FQKSKM+ +AV+LYE MMD P+KP   +CS+LLR IA   NPDL LV+RV +++EA G+ 
Sbjct: 303  FQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYS 362

Query: 634  LSKTDYDGIHRSLTSAGNFDEAEKIIKTMRNAGYQPDNITYSQLIYGLCKARRLEEIYDV 455
            LSK  YDGIHRSLTS G FD+AE I+K+MRNAGY+PDN+TYSQL++GLCKARRLEE   V
Sbjct: 363  LSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKV 422

Query: 454  LDRMEAEGVIPDIMTWTILIKGYCNGNAVDKALLCLAMMVEKGXXXXXXXLEVLVQGFLN 275
            LD MEA+G IPDI TWTILI+G+CN N +D AL+C A M+EK        L+VL+ GFLN
Sbjct: 423  LDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLN 482

Query: 274  QNKVFGAYQLLVEMTNKSHLKPWQYTYXXXXXXXXXXXXXXXXXXXXXLMKKQKYPPHAK 95
            Q K+ GAYQLL+E+TNK+H++PWQ TY                     LMKKQ YPP  +
Sbjct: 483  QKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPE 542

Query: 94   PFTKYIARAGSVEDAAELLRTITDKQYPSVS 2
            PF +YI++ G+V+DA + L+ ++ K+YPSVS
Sbjct: 543  PFVQYISKFGTVQDADDFLKVLSSKEYPSVS 573


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  303 bits (775), Expect = 4e-80
 Identities = 153/271 (56%), Positives = 189/271 (69%)
 Frame = -2

Query: 814  FQKSKMLKDAVELYEHMMDSPFKPLATECSLLLRVIAGCKNPDLDLVFRVVRRYEAAGFC 635
            FQK+KML+DAV+LYE MMD P+KP   +C++LLR I+   NPDL LVFRV  +YEA G  
Sbjct: 310  FQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNS 369

Query: 634  LSKTDYDGIHRSLTSAGNFDEAEKIIKTMRNAGYQPDNITYSQLIYGLCKARRLEEIYDV 455
            L K  YDGIHRSLTS G FDEA KI+++MR+AG +PDNITYSQL+YGLCKAR+LEE   +
Sbjct: 370  LCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKL 429

Query: 454  LDRMEAEGVIPDIMTWTILIKGYCNGNAVDKALLCLAMMVEKGXXXXXXXLEVLVQGFLN 275
            LD MEA G +PDI TWTILI+G+C    VDKAL+C A M+EK        LEVL+ GFL+
Sbjct: 430  LDEMEACGCVPDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLS 489

Query: 274  QNKVFGAYQLLVEMTNKSHLKPWQYTYXXXXXXXXXXXXXXXXXXXXXLMKKQKYPPHAK 95
            Q ++ GAY+LLVEM N +HL PWQ TY                     LMKKQ YPP  +
Sbjct: 490  QKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPE 549

Query: 94   PFTKYIARAGSVEDAAELLRTITDKQYPSVS 2
            PF +YI++ G+VEDA E L  ++ K+YPS S
Sbjct: 550  PFIEYISKFGTVEDAGEFLNALSAKKYPSQS 580


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  299 bits (765), Expect = 6e-79
 Identities = 148/271 (54%), Positives = 190/271 (70%)
 Frame = -2

Query: 814  FQKSKMLKDAVELYEHMMDSPFKPLATECSLLLRVIAGCKNPDLDLVFRVVRRYEAAGFC 635
            FQK+K++ DAV+LYE MMD PFKP   +CS+LLR I+    PDL+LVFRVV +YEA G  
Sbjct: 308  FQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNS 367

Query: 634  LSKTDYDGIHRSLTSAGNFDEAEKIIKTMRNAGYQPDNITYSQLIYGLCKARRLEEIYDV 455
            LSK  YDGIHRSLTS GNFDEA K++K M+ AGY+PDNITYSQL++GLCKARRLEE  +V
Sbjct: 368  LSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEV 427

Query: 454  LDRMEAEGVIPDIMTWTILIKGYCNGNAVDKALLCLAMMVEKGXXXXXXXLEVLVQGFLN 275
            LD MEA G +PDI TWTILI+G+C  N V KAL+CLA M+EK        L VL+  FL+
Sbjct: 428  LDEMEAHGCLPDIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLS 487

Query: 274  QNKVFGAYQLLVEMTNKSHLKPWQYTYXXXXXXXXXXXXXXXXXXXXXLMKKQKYPPHAK 95
            Q ++ GAY L ++M +K+ L+PWQ TY                     LMK+  +PP  +
Sbjct: 488  QKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPE 547

Query: 94   PFTKYIARAGSVEDAAELLRTITDKQYPSVS 2
            PF +YI+R G+V+DAA+ L+ ++ K+YPS S
Sbjct: 548  PFVQYISRFGTVDDAADFLKALSVKEYPSTS 578


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  296 bits (757), Expect = 5e-78
 Identities = 151/269 (56%), Positives = 182/269 (67%)
 Frame = -2

Query: 814 FQKSKMLKDAVELYEHMMDSPFKPLATECSLLLRVIAGCKNPDLDLVFRVVRRYEAAGFC 635
           FQK K+++DAV LYE MMD PFKP   +C +LLR +A   NPDLDLV RVV  Y+A G  
Sbjct: 157 FQKIKLMEDAVRLYEFMMDGPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNS 216

Query: 634 LSKTDYDGIHRSLTSAGNFDEAEKIIKTMRNAGYQPDNITYSQLIYGLCKARRLEEIYDV 455
           LSK+ YDG+HRS TSAG FDEAEKI+K MR+AGY+PDNITYSQL++GLCK++RLEE   V
Sbjct: 217 LSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKV 276

Query: 454 LDRMEAEGVIPDIMTWTILIKGYCNGNAVDKALLCLAMMVEKGXXXXXXXLEVLVQGFLN 275
           LD MEA G IPDI TWTILI+G+   N VDK LLCL  M EK        L+VLV+GFL+
Sbjct: 277 LDEMEAGGCIPDIKTWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLS 336

Query: 274 QNKVFGAYQLLVEMTNKSHLKPWQYTYXXXXXXXXXXXXXXXXXXXXXLMKKQKYPPHAK 95
           Q K+ GAY  LVEM NK  L PWQ TY                     LMKK  YPP  +
Sbjct: 337 QRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPE 396

Query: 94  PFTKYIARAGSVEDAAELLRTITDKQYPS 8
           PF +YI++ G+VEDA    + ++ K+YPS
Sbjct: 397 PFDQYISKFGTVEDAVNFFKVLSVKEYPS 425


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g48250, chloroplastic; Flags: Precursor
            gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
            thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  295 bits (756), Expect = 6e-78
 Identities = 147/269 (54%), Positives = 185/269 (68%)
 Frame = -2

Query: 814  FQKSKMLKDAVELYEHMMDSPFKPLATECSLLLRVIAGCKNPDLDLVFRVVRRYEAAGFC 635
            FQKS+M+ + V+LYE+MMD PFKP   +CSLLLR ++G  NPDLDLVFRV R+YE+ G  
Sbjct: 308  FQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKS 367

Query: 634  LSKTDYDGIHRSLTSAGNFDEAEKIIKTMRNAGYQPDNITYSQLIYGLCKARRLEEIYDV 455
            LSK  YDGIHRSLTS G FDEAE+I K MRNAGY+PDNITYSQL++GLCKA+RLEE   V
Sbjct: 368  LSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGV 427

Query: 454  LDRMEAEGVIPDIMTWTILIKGYCNGNAVDKALLCLAMMVEKGXXXXXXXLEVLVQGFLN 275
            LD+MEA+G  PDI TWTILI+G+C  N +DKAL C A M+EKG       L+VL+ GF+ 
Sbjct: 428  LDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVI 487

Query: 274  QNKVFGAYQLLVEMTNKSHLKPWQYTYXXXXXXXXXXXXXXXXXXXXXLMKKQKYPPHAK 95
             NK  GA   L+EM   +++KPWQ TY                     +MKKQ YP +A+
Sbjct: 488  HNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAE 547

Query: 94   PFTKYIARAGSVEDAAELLRTITDKQYPS 8
             F  Y+A+ G++EDA + L  ++ K  PS
Sbjct: 548  AFDGYLAKFGTLEDAKKFLDVLSSKDSPS 576