BLASTX nr result

ID: Cephaelis21_contig00035926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035926
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACC60972.1| phytochrome E [Vitis riparia]                           75   4e-12
ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera] gi...    75   6e-12
emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]    74   1e-11
sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E gi|1145714|gb...    70   1e-10
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...    62   6e-08

>gb|ACC60972.1| phytochrome E [Vitis riparia]
          Length = 1124

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 9/92 (9%)
 Frame = +2

Query: 152 GVAARGEE---THRSTAFPSSSAGNGNIGVA---AMAQYKADARLFSEFEQ---SGKSFN 304
           G+ +RG E   THR+  F SS+A N N   +    +AQY ADARL +EFEQ   SGKSFN
Sbjct: 2   GLGSRGGERRATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFN 61

Query: 305 YRNSVVNGPKIVGENVGDDEMNVYLSRLQRGG 400
           Y  SV+N P    E+V +D++  YLSR+QRGG
Sbjct: 62  YSRSVMNAP----ESVPEDQIIAYLSRIQRGG 89


>ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
           gi|183239020|gb|ACC60968.1| phytochrome E [Vitis
           vinifera]
          Length = 1124

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 9/92 (9%)
 Frame = +2

Query: 152 GVAARGEE---THRSTAFPSSSAGNGNIGVA---AMAQYKADARLFSEFEQ---SGKSFN 304
           G+ +RG E   THR+  F SS+A N N   +    +AQY ADARL +EFEQ   SGKSFN
Sbjct: 2   GLGSRGGERRATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFN 61

Query: 305 YRNSVVNGPKIVGENVGDDEMNVYLSRLQRGG 400
           Y  SV+N P    E+V +D++  YLSR+QRGG
Sbjct: 62  YSRSVMNAP----ESVPEDQIIAYLSRVQRGG 89


>emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
          Length = 1162

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
 Frame = +2

Query: 152 GVAARGEE---THRSTAFPSSSAGNGNIGVA---AMAQYKADARLFSEFEQ---SGKSFN 304
           G+ +RG E   THR+  F SS+A N N   +    +AQY ADARL +EFEQ   SGKSFN
Sbjct: 2   GLGSRGGERRATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFN 61

Query: 305 YRNSVVNGPKIVGENVGDDEMNVYLSRLQRGG 400
           Y  SV+N P    E+V +D++  YLSR QRGG
Sbjct: 62  YSRSVMNAP----ESVPEDQIIAYLSRXQRGG 89


>sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E gi|1145714|gb|AAA84970.1| phytochrome E
           [Ipomoea nil]
          Length = 1115

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +2

Query: 170 EETHRSTAFPSSSAGNGNIGVAAMAQYKADARLFSEFEQ---SGKSFNYRNSVVNGPKIV 340
           E   ++  F SS+  N N G  A+AQY ADA+L +EFEQ   SGKSF+Y  SV++ P   
Sbjct: 2   ENYGKAVTFSSSATSNLNTG-KAIAQYNADAKLMAEFEQSRESGKSFDYSRSVIHAP--- 57

Query: 341 GENVGDDEMNVYLSRLQRGG 400
            +NV ++EM  YLSR+QRGG
Sbjct: 58  -QNVTEEEMTAYLSRIQRGG 76


>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
           gi|223541166|gb|EEF42722.1| phytochrome B, putative
           [Ricinus communis]
          Length = 1131

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = +2

Query: 125 MGLQSEKGGGVAARGEETHRSTAFPSSSA-GNGNIGVAAMAQYKADARLFSEFEQ---SG 292
           MG Q+ +      RG  T  S+A  S       +   A +AQY ADA L +EFEQ   SG
Sbjct: 1   MGFQNAR-----ERGTTTLSSSAASSMKPFATNSENTATIAQYNADAGLLAEFEQSGVSG 55

Query: 293 KSFNYRNSVVNGPKIVGENVGDDEMNVYLSRLQRGG 400
           KSFNY  SV++ P     NV ++++  YLSR+QRGG
Sbjct: 56  KSFNYSRSVLSAP----HNVPEEQITAYLSRIQRGG 87


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