BLASTX nr result

ID: Cephaelis21_contig00035458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035458
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   3e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    77   1e-12
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|ABA94496.1| F-box domain containing protein, expressed [Oryza...    60   2e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/110 (40%), Positives = 64/110 (58%)
 Frame = +2

Query: 32  YGATCFRVIQLDLIKRQCGVITNLGDRSIFLGHNVAFSLGVTGFAGSIKANCIYFSDDCI 211
           Y  T F+V +LDL   +  V+++LGDR++FLG N++ SL    F G  K NCIY++DD  
Sbjct: 285 YRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDD-- 341

Query: 212 EAYGADEEYRPTELGGGRDMGVYNLEDGNIERFDNVESYSLIGPPVWVAP 361
             Y  D       +GG +D+G++NLEDG+IE            PP+WV P
Sbjct: 342 --YSEDNY---DGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/110 (40%), Positives = 63/110 (57%)
 Frame = +2

Query: 32  YGATCFRVIQLDLIKRQCGVITNLGDRSIFLGHNVAFSLGVTGFAGSIKANCIYFSDDCI 211
           Y  T F+V +LD    +  V+++LGDR++FLG N++ SL    F G  K NCIY++DD  
Sbjct: 285 YRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDD-- 341

Query: 212 EAYGADEEYRPTELGGGRDMGVYNLEDGNIERFDNVESYSLIGPPVWVAP 361
             Y  D       +GG +D+G++NLEDG+IE            PP+WV P
Sbjct: 342 --YSEDNY---DGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/110 (31%), Positives = 57/110 (51%)
 Frame = +2

Query: 32  YGATCFRVIQLDLIKRQCGVITNLGDRSIFLGHNVAFSLGVTGFAGSIKANCIYFSDDCI 211
           Y    F + ++D  K     +T+L D+++F+G N + S+      G  K N +YF+DD  
Sbjct: 357 YRTLLFGLFRMDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEK-NSVYFTDDYW 415

Query: 212 EAYGADEEYRPTELGGGRDMGVYNLEDGNIERFDNVESYSLIGPPVWVAP 361
           E    D  Y      GG DMGV+NL+D +++ F  +++  +  PP W  P
Sbjct: 416 ERMNEDYLY------GGHDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLP 459


>gb|ABA94496.1| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 414

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/110 (33%), Positives = 57/110 (51%)
 Frame = +2

Query: 32  YGATCFRVIQLDLIKRQCGVITNLGDRSIFLGHNVAFSLGVTGFAGSIKANCIYFSDDCI 211
           +  T  +V ++DL+ R      +LG+  + LGHN +  L    +   +KAN +YFSDD  
Sbjct: 301 WNTTMIKVHKVDLVARMLVEACDLGENVLILGHNQSLCLRADEYP-LLKANHVYFSDD-- 357

Query: 212 EAYGADEEYRPTELGGGRDMGVYNLEDGNIERFDNVESYSLIGPPVWVAP 361
                 E Y      G RD+GV+NLE+   E   +++ +S   PPVW+ P
Sbjct: 358 -----RELYIKGCKNGCRDIGVFNLENNCAEEIVSLQLWSNWPPPVWMTP 402


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +2

Query: 32  YGATCFRVIQLDLIKRQCGVITNLGDRSIFLGHNVAFSLGVTGFAGSIKANCIYFSDDCI 211
           Y    F V +LD    Q   ++ LGD+++F+G N + SL  T F+G +  NCIY++DD +
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCM-GNCIYYTDDYL 348

Query: 212 EAYGADEEYRPTELGGGRDMGVYNLEDGNIERFD----NVESYSLIGPPVWVAP 361
           +A   D  +      G  D+G++ L D  IE       N  S     PP+WV+P
Sbjct: 349 DA-NYDGHF------GDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395


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