BLASTX nr result

ID: Cephaelis21_contig00035387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035387
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi comple...   127   7e-28
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...   124   8e-27
ref|XP_002515077.1| pentatricopeptide repeat-containing protein,...   121   5e-26
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]   116   2e-24

>ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Glycine max]
          Length = 1114

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/97 (58%), Positives = 74/97 (76%)
 Frame = +2

Query: 2   NEAKTYMEEMLSNGFTPHFSLVHLLVKGFCNIGKSEEACGVLEEILKHGETPHMDTWMEL 181
           +EA  Y+EEMLS  F+PHF++VH LVKGFCN+G+ E+ACGVL + L+HGE PH+DTWM +
Sbjct: 281 DEASKYVEEMLSIDFSPHFAVVHALVKGFCNVGRVEDACGVLTKALEHGEAPHLDTWMAI 340

Query: 182 LPRISEEHDHDNINRRLREILKVEIKPHTRIVDAGAD 292
           +P I E  D   I+  L E+LK+EIK HTRIVD G +
Sbjct: 341 MPVICEVDDDGKISGALEEVLKIEIKGHTRIVDVGIE 377


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = +2

Query: 2   NEAKTYMEEMLSNGFTPHFSLVHLLVKGFCNIGKSEEACGVLEEILKHGETPHMDTWMEL 181
           +EA  Y+EEMLS GF+PHF+++H LVKGFCN+G+ EEACGVL + L+H E PH DTWM +
Sbjct: 339 DEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMII 398

Query: 182 LPRISEEHDHDNINRRLREILKVEIKPHTRIVDAGADL 295
           +P+I E  D   I+  L E+LK+EIK  TRIVDAG  L
Sbjct: 399 VPQICEVDDGVKIDGVLEEVLKIEIKGDTRIVDAGIGL 436


>ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545557|gb|EEF47061.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 262

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/98 (58%), Positives = 73/98 (74%)
 Frame = +2

Query: 2   NEAKTYMEEMLSNGFTPHFSLVHLLVKGFCNIGKSEEACGVLEEILKHGETPHMDTWMEL 181
           +EAK+Y+EEM+  GF+PHFS+ H LVKGFC +GK EEACGV+E +LKHGE PH DTW+ +
Sbjct: 151 DEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIEEACGVVEVLLKHGEVPHADTWIII 210

Query: 182 LPRISEEHDHDNINRRLREILKVEIKPHTRIVDAGADL 295
           LPRI E  D + I + L + + VEI   TRIV+AG  L
Sbjct: 211 LPRICEVDDLEGIRQSLDKAMMVEIMGDTRIVEAGIGL 248


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/98 (54%), Positives = 74/98 (75%)
 Frame = +2

Query: 2   NEAKTYMEEMLSNGFTPHFSLVHLLVKGFCNIGKSEEACGVLEEILKHGETPHMDTWMEL 181
           +EAK+++EEM+  GF+PHF++ + L+KGFCN+GK EEACGV+EE+LKHGE PH +TW+ +
Sbjct: 363 DEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMM 422

Query: 182 LPRISEEHDHDNINRRLREILKVEIKPHTRIVDAGADL 295
           + RI E  D   I   L ++ KVE+K  TRIV+AG  L
Sbjct: 423 VSRICEVDDLQRIGEILDKVKKVELKGDTRIVEAGIGL 460


>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/98 (54%), Positives = 70/98 (71%)
 Frame = +2

Query: 2   NEAKTYMEEMLSNGFTPHFSLVHLLVKGFCNIGKSEEACGVLEEILKHGETPHMDTWMEL 181
           +EAK Y+EEMLS GF+PHFS+ H L+ GFCN+GK EEAC VL E+L+HGE  H +TW+ +
Sbjct: 310 DEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAI 369

Query: 182 LPRISEEHDHDNINRRLREILKVEIKPHTRIVDAGADL 295
           +PRI E      +     E LK+EI P+TR+V+AG  L
Sbjct: 370 IPRICEVDKLVRMENIFDEXLKLEITPNTRLVEAGIGL 407


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