BLASTX nr result

ID: Cephaelis21_contig00035374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035374
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              111   7e-23
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    90   2e-16

>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/85 (61%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 SLSAPSPPIISFIEMASSTKELHQVHAHMLKTGIFHNPFSVSRLIAIAATTSR-ESLPYA 77
           S S P PPI+SF EMA+S  ELHQ HAH+LK+G+ H+ F+ SRLIA  +T S  +++PYA
Sbjct: 2   SSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYA 61

Query: 76  YSIFAKIPQPNKYMYNTLIRAYANS 2
           +SIF++IP PN YM+NT+IRAYANS
Sbjct: 62  HSIFSRIPNPNSYMWNTIIRAYANS 86


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/85 (61%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 SLSAPSPPIISFIEMASSTKELHQVHAHMLKTGIFHNPFSVSRLIAIAATTSR-ESLPYA 77
           S S P PPI+SF EMA+S  ELHQ HAH+LK+G+ H+ F+ SRLIA  +T S  +++PYA
Sbjct: 2   SSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYA 61

Query: 76  YSIFAKIPQPNKYMYNTLIRAYANS 2
           +SIF++IP PN YM+NT+IRAYANS
Sbjct: 62  HSIFSRIPNPNSYMWNTIIRAYANS 86


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -2

Query: 232 PIISFIEMASSTKELHQVHAHMLKTGIFHNPFSVSRLIAIAATTSRESLPYAYSIFAKIP 53
           P +S I+  S TK+L Q+HA ML+TG+F +PFS SRLI  AA +   SL YA  +F +IP
Sbjct: 37  PTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 52  QPNKYMYNTLIRAYANS 2
            PN Y +NTLIRAYA+S
Sbjct: 97  HPNLYTWNTLIRAYASS 113


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -2

Query: 232 PIISFIEMASSTKELHQVHAHMLKTGIFHNPFSVSRLIAIAATTSRESLPYAYSIFAKIP 53
           P +S I+  S TK+L Q+HA ML+TG+F +PFS SRLI  AA +   SL YA  +F +IP
Sbjct: 37  PTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 52  QPNKYMYNTLIRAYANS 2
            PN Y +NTLIRAYA+S
Sbjct: 97  HPNLYTWNTLIRAYASS 113


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -2

Query: 232 PIISFIEMASSTKELHQVHAHMLKTGIFHNPFSVSRLIAIAATTSRESLPYAYSIFAKIP 53
           P +S I+  S TK+L Q+HA ML+TG+F +PFS SRLI  AA +   SL YA  +F +IP
Sbjct: 37  PTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 52  QPNKYMYNTLIRAYANS 2
            PN Y +NTLIRAYA+S
Sbjct: 97  HPNLYTWNTLIRAYASS 113


Top