BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035216
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    67   1e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    67   1e-09
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...    67   1e-09
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    65   4e-09
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    64   1e-08

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -2

Query: 258  QEGLCPGISIGRNIPRISHLMFADDCMFFVEASYKAISNFNKVLNQYSSLAGQRINFQKF 79
            Q+ L   ++IG N   +SHL FADD +FF+ A+ +     + +L+ Y   +GQ IN +K 
Sbjct: 1269 QDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKS 1328

Query: 78   SIFFSPSTSPDQRLLFSSMLNI 13
            SIFFSP+T P+   L SS++ I
Sbjct: 1329 SIFFSPNTPPEIAHLLSSIMQI 1350


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = -2

Query: 258 QEGLCPGISIGRNIPRISHLMFADDCMFFVEASYKAISNFNKVLNQYSSLAGQRINFQKF 79
           Q+    G+ + R  P ISHL+FADD MF+ + + +A+    +++ +YS  +GQR+N+ K 
Sbjct: 660 QKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKS 719

Query: 78  SIFFSPSTSPDQRLLFSSMLNIRK 7
           SI+F    S ++R L    L I +
Sbjct: 720 SIYFGKHISEERRCLVKRKLGIER 743


>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = -2

Query: 258 QEGLCPGISIGRNIPRISHLMFADDCMFFVEASYKAISNFNKVLNQYSSLAGQRINFQKF 79
           + G  PGI +    PR++HL+FADD MFF     K+      +L++Y   +GQ+IN  K+
Sbjct: 595 ENGSLPGIRVAMGCPRVNHLLFADDTMFFCRVDPKSCLKLKSILHKYELASGQKINQAKY 654

Query: 78  SIFFSPSTSPDQRLLFSSMLNIRK 7
           SI FS  T P  R     +L I+K
Sbjct: 655 SITFSAKTPPAVRERVKQILLIQK 678


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/79 (37%), Positives = 49/79 (62%)
 Frame = -2

Query: 243 PGISIGRNIPRISHLMFADDCMFFVEASYKAISNFNKVLNQYSSLAGQRINFQKFSIFFS 64
           PG+ +  N PR++HL+FADD MFF ++  ++ +  +++L++Y   +GQ INF K S+ FS
Sbjct: 560 PGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFS 619

Query: 63  PSTSPDQRLLFSSMLNIRK 7
             T    +     +L IRK
Sbjct: 620 SKTPRSVKGQVKRILKIRK 638


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = -2

Query: 252  GLCPGISIGRNIPRISHLMFADDCMFFVEASYKAISNFNKVLNQYSSLAGQRINFQKFSI 73
            G   G  I +N P ISHL+FADDC  F +A          +L  Y S +GQ INFQK  +
Sbjct: 1086 GTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEV 1145

Query: 72   FFSPSTSPDQRLLFSSMLNIRKLL 1
            F+S +     +   S +L +++++
Sbjct: 1146 FYSRNVDDAVKASISQILGVQQVM 1169