BLASTX nr result

ID: Cephaelis21_contig00035150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035150
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re...   116   2e-24
ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [S...   109   3e-22
emb|CBI17828.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002453646.1| hypothetical protein SORBIDRAFT_04g009830 [S...   108   6e-22
ref|XP_002334271.1| glutamate-gated kainate-type ion channel rec...   107   8e-22

>ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like
           [Glycine max]
          Length = 823

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/116 (45%), Positives = 83/116 (71%)
 Frame = +3

Query: 150 VHVGVLLDSNSPMDNMVNVCLSIALSDFYAAHPNYKTRLFLHTKNAKEELDVDFAVLEML 329
           + +G++LD NS + +M N C+ +A  DFY  HP+YKTRL L T+++++ +    +V + L
Sbjct: 8   IPIGIVLDLNSSIGSMSNSCIWMAYQDFYERHPHYKTRLALQTRDSRDNVVTAASVAQEL 67

Query: 330 KNGEVHGVLGPQWSKEATFVVELGARAQVPVISFTAKNRAFSHSQGPYFVRTTPDD 497
            N +VH ++GPQ S++A FV+ELG++AQVPVISF+A + + S +Q PYF+R   DD
Sbjct: 68  LNEKVHAIIGPQTSEQAWFVIELGSKAQVPVISFSATSPSLSSTQKPYFIRAARDD 123


>ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [Sorghum bicolor]
           gi|241925792|gb|EER98936.1| hypothetical protein
           SORBIDRAFT_02g025250 [Sorghum bicolor]
          Length = 873

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +3

Query: 153 HVGVLLDSNSPMDNMVNVCLSIALSDFYAAHPNYKTRLFLHTKNAK-EELDVDFAVLEML 329
           HVGV+LD  +P+  +    +SIA+ DFYA HPNY TRL LH +++  +++    AV+++L
Sbjct: 32  HVGVVLDLGTPVGKVARTSISIAVEDFYAVHPNYTTRLVLHVRDSMTDDVQAAAAVIDLL 91

Query: 330 KNGEVHGVLGPQWSKEATFVVELGARAQVPVISFTAKNRAFSHSQGPYFVRTTPDD 497
           +N  V  ++GPQ S +A FV  LG + QVPVISFTA++   S    PYFVR T +D
Sbjct: 92  ENYNVQAIIGPQNSSQAVFVSALGNKCQVPVISFTARSTYLSSHYLPYFVRATVND 147


>emb|CBI17828.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/134 (38%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
 Frame = +3

Query: 99  VATTNGSQETAQSDYSVVHVGVLLDSNSPMDNMVNVCLSIALSDFYAAHPNYKTRLFLHT 278
           ++ ++G+Q    S  ++  +GV+LD  S +  M N C+S+A+SDFY+ + +Y+TRL LHT
Sbjct: 18  LSLSSGNQTNNSSSMTLYGIGVVLDMGSSLGRMANNCISMAVSDFYSINRHYQTRLVLHT 77

Query: 279 KNAK-EELDVDFAVLEMLKNGEVHGVLGPQWSKEATFVVELGARAQVPVISFTAKNRAFS 455
           +++  E L    + +++L+N  VH +LGPQ S+EA F+V+LG +A+VP+++F+      S
Sbjct: 78  RDSMGEPLYALSSAIDLLENKNVHAILGPQTSEEAEFLVDLGDKARVPIVTFSVTTPFLS 137

Query: 456 HSQGPYFVRTTPDD 497
             + PYFVR   +D
Sbjct: 138 QEKTPYFVRVAIND 151


>ref|XP_002453646.1| hypothetical protein SORBIDRAFT_04g009830 [Sorghum bicolor]
           gi|241933477|gb|EES06622.1| hypothetical protein
           SORBIDRAFT_04g009830 [Sorghum bicolor]
          Length = 882

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = +3

Query: 117 SQETAQSDYSVVHVGVLLDSNSPMDNMVNVCLSIALSDFYAAHPNYKTRLFLHTKNAK-E 293
           +Q   +S     H+GV+LD  + +  + +  +SIA+ DFY  HPN+ TRL LH +++K +
Sbjct: 20  AQNATESKVEEFHIGVVLDLGTTVGKVAHTSISIAVEDFYTVHPNHTTRLVLHVRDSKSD 79

Query: 294 ELDVDFAVLEMLKNGEVHGVLGPQWSKEATFVVELGARAQVPVISFTAKNRAFSHSQGPY 473
           ++    AVLE+L+N  V  ++GPQ S +A FV  LG R QVP+ISFTA + + S    PY
Sbjct: 80  DVQAASAVLELLENYNVQAIIGPQKSSQAVFVSALGNRYQVPIISFTATSTSLSSQSLPY 139

Query: 474 FVRTTPDD 497
           FV+ T  D
Sbjct: 140 FVQATACD 147


>ref|XP_002334271.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222870492|gb|EEF07623.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 249

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
 Frame = +3

Query: 147 VVHVGVLLDSNSPMDNMVNVCLSIALSDFYAAHPNYKTRLFLHTKNAKEEL-DVDFAVLE 323
           ++  GV+LD NS +  M   C+S A +DFYA + +Y+TR+ L T+N+K ++     A L+
Sbjct: 29  IIRAGVVLDMNSAVGKMAESCISAAETDFYARNADYRTRISLATRNSKGDVVTAASAALD 88

Query: 324 MLKNGEVHGVLGPQWSKEATFVVELGARAQVPVISFTAKNRAFSHSQGPYFVRTTPDD 497
           ++KN EV  ++GPQ S EA FV+ELGA+ QVP++SF+A + A +  Q  YF+RT   D
Sbjct: 89  LMKNEEVEAIIGPQRSSEAKFVIELGAKTQVPILSFSATSPALTPVQSNYFIRTAQSD 146


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