BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035073
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   100   3e-19
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    84   3e-14
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    84   4e-14
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    79   2e-12
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    78   3e-12

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  100 bits (250), Expect = 3e-19
 Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
 Frame = -1

Query: 585 RGIFNKPSLRHLRKLIKLYSVAFLVLMEPMARANKLESTALSLGFVFYDSTS----NNKL 418
           +G+ N P++RHLR++  LY    + L E   R N LE+    LGF    +      +  L
Sbjct: 9   QGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSGGL 68

Query: 417 WIMWKKGFSVLMISHSNQIAHFVVVHDDILTTLYLTAVYAKSTRGECLQLWN*LQEVKLS 238
            +MWK    + ++    ++   +++  D     YLT +Y +  + E  +LW  L  + LS
Sbjct: 69  ALMWKDSVQIKVLQSDKRLIDALLIWQD--KEFYLTCIYGEPVQAERGELWERLTRLGLS 126

Query: 237 RLDTPWIIEGDFNVTVDCSEYLGPAQPYLGSMIDFKNFIYACSLFHLPTFGGVYTWSGVH 58
           R   PW++ GDFN  VD SE +G       S ++F+  + +C L+ +   G  ++W G  
Sbjct: 127 R-SGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNR 185

Query: 57  RTGRV*KRLDRLLENQAWL 1
               V  RLDR + NQAW+
Sbjct: 186 NDELVQCRLDRTVANQAWM 204


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
 Frame = -1

Query: 585 RGIFNKPSLRHLRKLIKLYSVAFLVLMEPMARANKLESTALSLGF----VFYDSTSNNKL 418
           +G+    ++R L ++ ++Y +  L L+E   + N      + +GF    +      +  L
Sbjct: 371 QGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCIISPRGLSGGL 430

Query: 417 WIMWKKGFSVLMISHSNQIAHFVVVHDDILTTLYLTAVYAKSTRGECLQLWN*LQEVKLS 238
            + WKK  S+ +ISH  ++    V + +     YL+ +Y      E   LW  LQ V   
Sbjct: 431 VVYWKKHLSIQVISHDVRLVDLYVEYKNF--NFYLSCIYGHPIPSERHHLWEKLQRVSAH 488

Query: 237 RLDTPWIIEGDFNVTVDCSEYLGPAQPYLGSMIDFKNFIYACSLFHLPTFGGVYTWSGVH 58
           R   PW++ GDFN  ++ +E  G  +  +GS+ +F N I  C++  L + G  Y+W G  
Sbjct: 489 R-SGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKR 547

Query: 57  RTGRV*KRLDRLLENQAW 4
           +   +   LDR+  N  W
Sbjct: 548 QNETIESCLDRVFINSDW 565


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
 Frame = -1

Query: 585 RGIFNKPSLRHLRKLIKLYSVAFLVLMEPMARANKLESTALSL-----GFVFYDSTSNNK 421
           RG  N    R+ RK  KL    F  ++E   + ++   + LS          Y+  +  +
Sbjct: 10  RGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFAALGR 69

Query: 420 LWIMWKKGFSVLMISHSNQIAHFVVVHDDILTTLYLTAVYAKSTRGECLQLWN*LQEVKL 241
           +W++W     V ++S S+Q     V    I T   +T VYA + R    +LW+ L+ +  
Sbjct: 70  IWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELELLAA 129

Query: 240 SRL--DTPWIIEGDFNVTVDCSEYLGPAQPYLGSMIDFKNFIYACSLFHLPTFGGVYTWS 67
           ++   D PWII GDFN ++D  +           M +F+  +   ++  LP  G  YTW 
Sbjct: 130 NQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWW 189

Query: 66  GVHRTGRV*KRLDRLLENQAWL 1
                  + K++DR+L N +WL
Sbjct: 190 NNQENNPIAKKIDRILVNDSWL 211


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
 Frame = -1

Query: 420 LWIMWKKGFSVLMISHSNQIAHFVVVHDDILTTLYLTAVYAKSTRGECLQLWN*LQEVKL 241
           +W++WK    +     S Q+    V  +D L   + + VYA +   E   LW  LQ+ K 
Sbjct: 276 IWVLWKSNVRLTPFYKSGQLITCSVKLEDQLEEFFCSFVYASNFVEERKNLWAELQDHKD 335

Query: 240 SRL--DTPWIIEGDFNVTVDCSEYLG-PAQPYLGS-MIDFKNFIYACSLFHLPTFGGVYT 73
           S +    PW+I GDFNVT+D  E+    + P + S M DF+  I +C L  + + G +YT
Sbjct: 336 SPIISSKPWLIFGDFNVTLDMKEHSNCDSNPVVTSGMRDFQQMIRSCDLSDMASHGPLYT 395

Query: 72  WSGVHRTGRV*KRLDRLLENQAW 4
           W        + K+LDR++ N  W
Sbjct: 396 WCNKKEQDLILKKLDRVMVNDIW 418


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
 Frame = -1

Query: 552 LRKLIKLYSVAFLVLMEPMARANKLESTALSLGFVFYDSTSNNK----LWIMWKKGFSVL 385
           L +L ++Y+   L L+E + + +K+   A  LGF    +   N     L +MWK   S+ 
Sbjct: 401 LFRLFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLALMWKNNVSLS 460

Query: 384 MISHSNQIAHFVVVHDDILTTLYLTAVYAKSTRGECLQLWN*LQEVKLSRLDTPWIIEGD 205
           +IS   ++    V  ++   + YL+ VY   T+ E  QLW  L+ +  +R +  W++ GD
Sbjct: 461 LISQDERLIDSHVTFNN--KSFYLSCVYGHPTQSERHQLWQTLEHISDNR-NAEWLLVGD 517

Query: 204 FNVTVDCSEYLGPAQPYLGSMIDFKNFIYACSLFHLPTFGGVYTWSGVHRTGRV*KRLDR 25
           FN  +  +E +G       +  +F+N +  C +  + + G  ++W G   T  V   LDR
Sbjct: 518 FNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVGERHTHTVKCCLDR 577

Query: 24  LLENQAW 4
           +  N AW
Sbjct: 578 VFINSAW 584