BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035007
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    69   4e-15
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    76   1e-14
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    72   5e-14
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    71   3e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                70   5e-13

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 69.3 bits (168), Expect(2) = 4e-15
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = -1

Query: 494 ALCRRFL-----CDGGKPLVAWKDLEVPGDEGGLGIRDAKARNNALLAKVLWNIYHKKDS 330
           A+CR FL     C   K  VAW  +  P ++GGL + + ++ N A L K+LWN+Y K+DS
Sbjct: 120 AVCRSFLWTGKSCVTKKSPVAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNLYKKEDS 179

Query: 329 LWVKWVYHTYLQRDSIWRMQPRNDLSALMKKLIVVR 222
           LW++WV+  Y + + I  +  +   S +MK ++  R
Sbjct: 180 LWIQWVHTYYTRGEDIMTVPIKASCSWIMKGILKQR 215



 Score = 38.5 bits (88), Expect(2) = 4e-15
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 601 IHHAGRLELIRSVLLGIHCFWLSALPIPSGVVDRV 497
           + ++GR++L+RSV+     +W+  LP+P GV+ R+
Sbjct: 84  LSYSGRVQLLRSVIFATANYWMQCLPLPKGVIRRI 118


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 76.3 bits (186), Expect(2) = 1e-14
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = -1

Query: 491 LCRRFLCDGG-----KPLVAWKDLEVPGDEGGLGIRDAKARNNALLAKVLWNIYHKKDSL 327
           +C  +L  GG     K  +AW D+  P DEGGLG+R  K  N+    K++W I    DSL
Sbjct: 224 MCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSL 283

Query: 326 WVKWVYHTYLQRDSIWRMQPRNDLSALM-KKLIVVRD 219
           WVKW++ T L++ S W ++    L + M KK++  RD
Sbjct: 284 WVKWIHATLLKQVSFWAVRENTSLGSWMWKKVLKFRD 320



 Score = 30.4 bits (67), Expect(2) = 1e-14
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 601 IHHAGRLELIRSVLLGIHCFWLSALPIP 518
           + +AGRL LI SVL  I  FW+ A  +P
Sbjct: 187 LSYAGRLNLISSVLWSICNFWMGAFRLP 214


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 71.6 bits (174), Expect(2) = 5e-14
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
 Frame = -1

Query: 491 LCRRFLCDG-----GKPLVAWKDLEVPGDEGGLGIRDAKARNNALLAKVLWNIYHKKDSL 327
           LC  FL  G      K  +AW+ +  P  EGGLG++  K  N+    K++W I  + DSL
Sbjct: 360 LCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSL 419

Query: 326 WVKWVYHTYLQRDSIWRMQPRNDLSALMKKLIVVRDLILHKEGSD----EGASMRMDDWK 159
           WV+W+    L+R++ W  +  +  S + KKL+  RD        D    E AS   DDW 
Sbjct: 420 WVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWS 479

Query: 158 VDG 150
             G
Sbjct: 480 SKG 482



 Score = 32.7 bits (73), Expect(2) = 5e-14
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 601 IHHAGRLELIRSVLLGIHCFWLSALPIPSGVVDRV 497
           + +AGRL L+ SVL  I  FWLSA  +P   V  +
Sbjct: 323 LSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREI 357


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 70.9 bits (172), Expect(2) = 3e-13
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
 Frame = -1

Query: 491 LCRRFLCDGG-----KPLVAWKDLEVPGDEGGLGIRDAKARNNALLAKVLWNIYHKKDSL 327
           +C  +L  GG     K  + W  +  P +EGGLG+R  K  N+    K++W I    DSL
Sbjct: 91  MCSAYLWSGGELNTSKAKITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSL 150

Query: 326 WVKWVYHTYLQRDSIWRMQPRNDLSALM-KKLIVVRDL--ILHKEGSDEGA--SMRMDDW 162
           WVKW+  + L++ S W ++    L + M +K++  RD+   L K   + GA  S   DDW
Sbjct: 151 WVKWIQSSLLKKVSFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGARTSFWYDDW 210



 Score = 30.8 bits (68), Expect(2) = 3e-13
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 601 IHHAGRLELIRSVLLGIHCFWLSALPIPSGVVDRV 497
           + +AGRL LI SVL  I  FW+ A  +P   +  +
Sbjct: 54  LSYAGRLNLISSVLWSICNFWMGAFRLPRDCIREI 88


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 70.1 bits (170), Expect(2) = 5e-13
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
 Frame = -1

Query: 491 LCRRFLCDGG-----KPLVAWKDLEVPGDEGGLGIRDAKARNNALLAKVLWNIYHKKDSL 327
           LC  FL  G      K  ++W  +  P  EGGLG+R+ K  N+    K++W I    +SL
Sbjct: 489 LCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSL 548

Query: 326 WVKWVYHTYLQRDSIWRMQPRNDL-SALMKKLIVVRDLILH----KEGSDEGASMRMDDW 162
           W KWV    +++ SIW ++    + S + +K++ +RD+       + G+ E AS   D W
Sbjct: 549 WTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHW 608

Query: 161 KVDG 150
              G
Sbjct: 609 SAHG 612



 Score = 30.8 bits (68), Expect(2) = 5e-13
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 610 FLIIHHAGRLELIRSVLLGIHCFWLSALPIP 518
           F     AGR  LI+SVL  I  FWL+A  +P
Sbjct: 449 FRFFSFAGRFNLIKSVLWSICNFWLAAFRLP 479