BLASTX nr result

ID: Cephaelis21_contig00034925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034925
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...    82   3e-14
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   8e-14
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   8e-14
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   9e-13
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    77   2e-12

>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
           gi|241916792|gb|EER89936.1| hypothetical protein
           SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = -2

Query: 317 LWNQLSHLL--NSTLPAIVLGDFNSILCASEKLGGKPFSPNESFDFAAFVHHNSLVDLGF 144
           +W Q+ H +  N  LP I +GD N+I+  +EKLG +P +     +F   V      DLG+
Sbjct: 121 IWRQIRHFVMSNQDLPVICMGDMNNIMNVTEKLGPRPANQRLISNFCCLVKDCGFFDLGY 180

Query: 143 SGSSFTWCNNRAGVHRIYKRLDRVFANPSWFSSSLDTKVMHLPRVAS 3
            G ++TW N R      Y+RLDR F N  W ++  +T V HLP + S
Sbjct: 181 HGPAYTWSNKRFSSFPTYERLDRFFGNAEWCANFPNTSVFHLPMLYS 227


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/92 (42%), Positives = 51/92 (55%)
 Frame = -2

Query: 278 PAIVLGDFNSILCASEKLGGKPFSPNESFDFAAFVHHNSLVDLGFSGSSFTWCNNRAGVH 99
           P +V GD N +L  +EK+GG+     +      ++  N+L+DLGF G  FTW N R G  
Sbjct: 133 PWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGS 192

Query: 98  RIYKRLDRVFANPSWFSSSLDTKVMHLPRVAS 3
            I +RLDR   N  W     DTKV+HLPR  S
Sbjct: 193 LIKERLDRALVNSEWLDLFPDTKVIHLPRTFS 224


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = -2

Query: 410 FVAIHFIYLPTQFEFQAIFVHASCDYTVRVSLWNQLSHLLNS-TLPAIVLGDFNSILCAS 234
           F+A     L    +F AIF++A      + S W++L   ++S + P I+LGDFN I   S
Sbjct: 91  FIACSINLLNQNLQFVAIFIYAPAQKEFKSSFWDELIAYVSSLSFPFIILGDFNEINSPS 150

Query: 233 EKLGGKPFSPNESFDFAAFVHHNSLVDLGFSGSSFTWCNNRAGVHRIYKRLDRVFANPSW 54
           +KLGG PFS + ++            ++ F+G  FTW   + G + I++RLDR  A+ SW
Sbjct: 151 DKLGGAPFSSSRAYYMQNLFSQVDCTEISFTGQIFTWRKKKDGPNNIHERLDRGVASTSW 210


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/109 (30%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = -2

Query: 326 RVSLWNQLS-HLLNSTLPAIVLGDFNSILCASEKLGGKPFSPNESFDFAAFVHHNSLVDL 150
           R  +W +++ ++  + L ++++GDFN I   ++K+GG  + P +   F+ +     L ++
Sbjct: 119 RGEVWERIADYISRNPLDSVIMGDFNQIEFLNQKMGGSTYIPGKE-TFSQWRDQLGLSEI 177

Query: 149 GFSGSSFTWCNNRAGVHRIYKRLDRVFANPSWFSSSLDTKVMHLPRVAS 3
            F G +FTWCNNR+   R+Y+RLDR +A   W     + +++++P + S
Sbjct: 178 NFQGQNFTWCNNRSEPERVYERLDRAYATEDWLHRYSEARILNMPILIS 226


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/94 (43%), Positives = 56/94 (59%)
 Frame = -2

Query: 284  TLPAIVLGDFNSILCASEKLGGKPFSPNESFDFAAFVHHNSLVDLGFSGSSFTWCNNRAG 105
            +LP +VLGDFN +L  SEK GG P  P     F  F+++  L DL F G  F+W   R G
Sbjct: 734  SLPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHG 793

Query: 104  VHRIYKRLDRVFANPSWFSSSLDTKVMHLPRVAS 3
               I +RLDR   N +W SS  +T+++HLP++ S
Sbjct: 794  RVFIKERLDRALGNIAWSSSQPNTQILHLPKIGS 827


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