BLASTX nr result

ID: Cephaelis21_contig00034889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034889
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK01137.1|AF331659_1 starch phosphorylase [Ipomoea batatas]        57   2e-06
ref|NP_190281.1| alpha-glucan phosphorylase isozyme H [Arabidops...    55   5e-06
ref|XP_002877534.1| alpha-glucan phosphorylase 2 [Arabidopsis ly...    55   5e-06
gb|AAL10498.1| AT3g46970/F13I12_20 [Arabidopsis thaliana]              55   5e-06

>gb|AAK01137.1|AF331659_1 starch phosphorylase [Ipomoea batatas]
          Length = 539

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   SSIRVLDHNPQKPVVRMANLCVVSSHTVRSVLAVY 106
           S+I +LDHNPQKPVVRMANLCV+SSHTV  V  ++
Sbjct: 290 SAICILDHNPQKPVVRMANLCVISSHTVNGVAQLH 324


>ref|NP_190281.1| alpha-glucan phosphorylase isozyme H [Arabidopsis thaliana]
           gi|14916634|sp|Q9SD76.1|PHS2_ARATH RecName:
           Full=Alpha-glucan phosphorylase 2, cytosolic;
           Short=AtPHS2; AltName: Full=Alpha-glucan phosphorylase,
           H isozyme; AltName: Full=Starch phosphorylase H
           gi|6522578|emb|CAB61943.1| starch phosphorylase H
           (cytosolic form)-like protein [Arabidopsis thaliana]
           gi|19699065|gb|AAL90900.1| AT3g46970/F13I12_20
           [Arabidopsis thaliana] gi|27764912|gb|AAO23577.1|
           At3g46970/F13I12_20 [Arabidopsis thaliana]
           gi|332644704|gb|AEE78225.1| alpha-glucan phosphorylase
           isozyme H [Arabidopsis thaliana]
          Length = 841

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   SSIRVLDHNPQKPVVRMANLCVVSSHTVRSVLAVY 106
           SS+ +LD+NPQKPVVRMANLCVVSSHTV  V  ++
Sbjct: 428 SSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLH 462


>ref|XP_002877534.1| alpha-glucan phosphorylase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297323372|gb|EFH53793.1| alpha-glucan phosphorylase 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 841

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   SSIRVLDHNPQKPVVRMANLCVVSSHTVRSVLAVY 106
           SS+ +LD+NPQKPVVRMANLCVVSSHTV  V  ++
Sbjct: 428 SSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLH 462


>gb|AAL10498.1| AT3g46970/F13I12_20 [Arabidopsis thaliana]
          Length = 841

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   SSIRVLDHNPQKPVVRMANLCVVSSHTVRSVLAVY 106
           SS+ +LD+NPQKPVVRMANLCVVSSHTV  V  ++
Sbjct: 428 SSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLH 462


Top