BLASTX nr result

ID: Cephaelis21_contig00034874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034874
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    66   3e-09
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...    66   3e-09
ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = +3

Query: 159 PPKIPLSPGSFQENYRIICNLLLSLTRSGPLTRGQALHCHVIKSGIQIIPLVS 317
           P + PL+  SF++NYR ICNLLLS TRS  L +G  LH H++K G+Q IPLVS
Sbjct: 11  PSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVS 63


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = +3

Query: 159 PPKIPLSPGSFQENYRIICNLLLSLTRSGPLTRGQALHCHVIKSGIQIIPLVS 317
           P + PL+  SF++NYR ICNLLLS TRS  L +G  LH H++K G+Q IPLVS
Sbjct: 11  PSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVS 63


>ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|222867333|gb|EEF04464.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = +3

Query: 150 PQNPPKIPLSPGSFQENYRIICNLLLSLTRSGPLTRGQALHCHVIKSGIQIIPLV 314
           PQN P    S    ++ Y  IC+LLLS TRS  L +GQ +H H+IKSG+Q+IPLV
Sbjct: 41  PQNSPNRFCS----EKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLV 91


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