BLASTX nr result

ID: Cephaelis21_contig00034862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034862
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]               95   7e-18
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]    95   7e-18
ref|XP_002532847.1| pentatricopeptide repeat-containing protein,...    94   9e-18
ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/81 (55%), Positives = 54/81 (66%)
 Frame = -2

Query: 244 LIDGCCKNGDINKAKELFCRMQGFGLVANQYTYTALINXXXXXXXXXXXFELYEKMKSEG 65
           LIDGCCKNGDI + K+LF +M    +VANQYTYT LIN            ELYEKMK  G
Sbjct: 205 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 264

Query: 64  ALPDLYTYNSLIHEECNDGTI 2
            +P++YTYNS+I   CNDG +
Sbjct: 265 IVPNVYTYNSMICRCCNDGKL 285


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/81 (55%), Positives = 54/81 (66%)
 Frame = -2

Query: 244 LIDGCCKNGDINKAKELFCRMQGFGLVANQYTYTALINXXXXXXXXXXXFELYEKMKSEG 65
           LIDGCCKNGDI + K+LF +M    +VANQYTYT LIN            ELYEKMK  G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251

Query: 64  ALPDLYTYNSLIHEECNDGTI 2
            +P++YTYNS+I   CNDG +
Sbjct: 252 IVPNVYTYNSMICRCCNDGKL 272


>ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527384|gb|EEF29525.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/81 (55%), Positives = 56/81 (69%)
 Frame = -2

Query: 244 LIDGCCKNGDINKAKELFCRMQGFGLVANQYTYTALINXXXXXXXXXXXFELYEKMKSEG 65
           LIDGCCKNGD+ +AK LF +M    LVANQYTYT LIN           FEL+EKM+ +G
Sbjct: 193 LIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDG 252

Query: 64  ALPDLYTYNSLIHEECNDGTI 2
             P+LYTYN +I+E CN+G +
Sbjct: 253 VFPNLYTYNCMINEFCNEGKL 273


>ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/81 (55%), Positives = 54/81 (66%)
 Frame = -2

Query: 244 LIDGCCKNGDINKAKELFCRMQGFGLVANQYTYTALINXXXXXXXXXXXFELYEKMKSEG 65
           LI+ CC+NGDI++AK +F RM   GL ANQY YT +IN           FELY+KMK  G
Sbjct: 148 LIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVG 207

Query: 64  ALPDLYTYNSLIHEECNDGTI 2
            LP+LYTYNSLI E C DG +
Sbjct: 208 VLPNLYTYNSLITEYCRDGKL 228


>ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/81 (55%), Positives = 54/81 (66%)
 Frame = -2

Query: 244 LIDGCCKNGDINKAKELFCRMQGFGLVANQYTYTALINXXXXXXXXXXXFELYEKMKSEG 65
           LI+ CC+NGDI++AK +F RM   GL ANQY YT +IN           FELY+KMK  G
Sbjct: 148 LIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVG 207

Query: 64  ALPDLYTYNSLIHEECNDGTI 2
            LP+LYTYNSLI E C DG +
Sbjct: 208 VLPNLYTYNSLITEYCRDGKL 228


Top